Gene Sala_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0892 
Symbol 
ID4082792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp899994 
End bp900422 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID638009253 
Producthypothetical protein 
Protein accessionYP_615943 
Protein GI103486382 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.204366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTATG GCCCCGCGCG CCTGCTTCCC GGCGATCAGA TCCAGATCAC CACCAACCCC 
GATACCGAAC CTTTCTGGCA AGCGGCACGA GAGCACAGGC TTACGGCCTG TCAGTGCGGC
GAGTGCGGCG CGTTCCGGAT GCCGCCCACG CCCGTCTGCC CCCATTGCGG CAGCCGGAAA
AAGGACTGGC CGACGCTTCC GGGCACGGCG ACCGTCTTCA GCTATGTCAT TTGCAACAAG
AATCCGAAGA CGGGGGAGGA TTTTGTCTAT GTTCCCGTGG TCGTCGATCT GGACGGTGCG
CCGGGGGCGC GGCTCAACGC AAATGTCACC GGCTGCGATG CCGAAGAGGT GCATATCGGC
ATGAAGGTTG CGGTCGAATG GACGCCGATT CAGGAGGATT GGGTGCTGCC CAATTTCCGC
AAGGCCTGA
 
Protein sequence
MVYGPARLLP GDQIQITTNP DTEPFWQAAR EHRLTACQCG ECGAFRMPPT PVCPHCGSRK 
KDWPTLPGTA TVFSYVICNK NPKTGEDFVY VPVVVDLDGA PGARLNANVT GCDAEEVHIG
MKVAVEWTPI QEDWVLPNFR KA