Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0884 |
Symbol | |
ID | 4082674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 889801 |
End bp | 890595 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638009245 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_615935 |
Protein GI | 103486374 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCG ATAACAGCAT CGCCGCCGTC GTGACCGGGG GAGCGTCGGG ACTTGGCCGG GCAAGCGCCG AGGCGCTGGC CCAGAGCGGC GTCAAGGTCG CCATTTTCGA CGTGAATGAA GAGGGCGGAC GCGCTGTCGC GGAAGCAATT GGCGGCATAT TCTGCAAGGT CGATATCACC AGCGAGGATT CCGTCGTCGC GGGATATGAG GCGGCGCGCG CGGCGCATGG TCAGGAACGC ATCCTTGTCC ACTGCGCGCA GATTTCAAAG GGCGGAAAGA CCGTGCGCTA TGACAAGGCG AGCGGTGGCT ATGTTCGCTA TTCGACCGAG GATTATGCCT TTTCGGCGCA GGGCATTCTG ATCGCCAGCT ATCGCCTCGC GTCATTGGCT GCGCTTGGCA TGGCGAATGC CGACCCGCTG AACGATGACG GCGAGCGCGG GACGATCATC CTGACCGCTT CGGCTGCGGC GCAGGACGCG CAGATCGGCC AGGTCGGTTA TGGTTCGCTC AAGGCGGGCG TGAACGGCCT CGTTCTGCCG ATGGCGCGCG ACTTGATGGA CCTTGGCATA CGGGTCAACT CCATCATGCC GGGAATATTC GCGACTCCGC CGATGCTGGC GGTCAAGGAC AGGGCGCCCG CCATCTTTGA AGGGCTCGCC GCGTCGGTGC CTTTCCCCAA GCGGTTGGGA AAACCCGAAG AGTTCGGCAG CCTGGTGCTG GAACTCGCGC GTAACAGCTA TTTCAACGGG CAAAATCTGC GGTTGGACGG CGCCATTCGC ATGCCGCCGA AATAG
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Protein sequence | MKLDNSIAAV VTGGASGLGR ASAEALAQSG VKVAIFDVNE EGGRAVAEAI GGIFCKVDIT SEDSVVAGYE AARAAHGQER ILVHCAQISK GGKTVRYDKA SGGYVRYSTE DYAFSAQGIL IASYRLASLA ALGMANADPL NDDGERGTII LTASAAAQDA QIGQVGYGSL KAGVNGLVLP MARDLMDLGI RVNSIMPGIF ATPPMLAVKD RAPAIFEGLA ASVPFPKRLG KPEEFGSLVL ELARNSYFNG QNLRLDGAIR MPPK
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