| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0881 |
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| Symbol | |
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| ID | 4082671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 886665 |
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| End bp | 888164 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009242 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_615932 |
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| Protein GI | 103486371 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGA TGACCGAAAA GCTTCGTGCC ATCATGGCGC TCGACCCCGA CCGGAGCGAG
ATTGATTTCG AGGGAGTCGA TTATAGCTGG CGGCAGATCG CCGACGCGGT GCGCGCCATT
GAAACGGCGC TCGCCGATAT GGGCCTGCCC GCCGATGCAC GCGTCGGCGT CCTGCTTCGC
AACCGGCCGG GCCATGTCGC GGCGATCGTG GCAGTGCTTT CGACCGACCG TTGCCTGGTA
ACATTGAACC CCATTCTACC CGACGCGCGC CTGTTCGCCG ATGTCGAGGG GCTGGCGTTG
CCGGCCGTCA TCGCCGATGC GAGCGATCTG GCGCGACCCG GCCTTGCCGG GGCGCTAACG
AACGCGGGGT CGGCGGTGAT CGAGATCGGA CCGCGGCTGG AGGGCGTCCG TGTGGTGCAG
CAAAAGCTGC GGCACGCCGA CCAAGTCTCG CCCGGCGTCG CCATCGAAAT GCTGACCAGC
GGCACTACCG GCCCGCCCAA GCGCGTGCCG CTCAGCCGCG ATGCCTTCGA CGCCAGCTTT
CGTGGATTCA TGCGCTATGA ACGGGGGCGC AGCTTCGACG ATCCACCGCG GCTGAGCTCG
GGCTGCACCA TGATCGTCAA TCCGCTGACC CACATCGGGG GTATTTACGG CTGCATCGGC
GCCCTTGCGG CCGGGCGAAA AATTGCGCTG CTCGAAAAGT TCAGCGTCGA GGCGTGGGTT
GGCGCGGTGA AGCGCAACCG CCCGGCGGTC GCGCCCGCGG TTCCATCGGC GGTGCGGATG
CTGCTCGACG CCGATCTCGA CCCCGACGAT CTGTCGAGCC TCAAGTCACT GATTTCCGGT
ACTGCGCCGC TGTCACCCGA TCTGGTCGAC GCCTTCCTTG CCAAATATGG CATCCCCATC
TGCGCCAACT ATGGTGCGAC CGAGTTCGCT GGCGCCGTGG CCGGGTGGAA TATCGACGAT
TTCCGGAAGT TCTGGACTGA AAAGCGTGGT TCCGTGGGGC GCATCCACGC CGATATTGAA
GCGCGCGTCG TGGATGCCGA CAGCGGTGCG GAACTGCCCG CCGGTCGGGA AGGGCTGCTC
GAACTCAAGG GGCAGCAGCT CAACAATAAC ATGCAATGGC TCCGCACGAC CGATCGTGCC
GTGCTGGACG CTGATGGCTT TCTTTTCATC AAGGGGCGGG CCGACAATGC GATCATTCGC
GGCGGGTTCA AAATCCACCC GGATGATGTT GTTCAGGTGC TCAACATGCA TCCTTCTGTT
CGCGAATCCG CCGTGGTCGG AATCGACGAC GATCGGTTGG GCGCCGTACC CGCCGCAGCG
ATCATCCTGA AGGATGGAAC CGATGTGCCG ACCACCGCCG ACCTGAAGGC GTGGCTGAAG
GAACGCCTGA TTGCCTATCA GGTGCCGACC CGCATCCAGA TCGTCACCGA CTTTCCGCGC
ACGCCGTCCA TGAAGCCCTC GGCACCGGGC CTGCGCGCCC TTTTTGCGGA GGATGAATGA
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| Protein sequence | MALMTEKLRA IMALDPDRSE IDFEGVDYSW RQIADAVRAI ETALADMGLP ADARVGVLLR
NRPGHVAAIV AVLSTDRCLV TLNPILPDAR LFADVEGLAL PAVIADASDL ARPGLAGALT
NAGSAVIEIG PRLEGVRVVQ QKLRHADQVS PGVAIEMLTS GTTGPPKRVP LSRDAFDASF
RGFMRYERGR SFDDPPRLSS GCTMIVNPLT HIGGIYGCIG ALAAGRKIAL LEKFSVEAWV
GAVKRNRPAV APAVPSAVRM LLDADLDPDD LSSLKSLISG TAPLSPDLVD AFLAKYGIPI
CANYGATEFA GAVAGWNIDD FRKFWTEKRG SVGRIHADIE ARVVDADSGA ELPAGREGLL
ELKGQQLNNN MQWLRTTDRA VLDADGFLFI KGRADNAIIR GGFKIHPDDV VQVLNMHPSV
RESAVVGIDD DRLGAVPAAA IILKDGTDVP TTADLKAWLK ERLIAYQVPT RIQIVTDFPR
TPSMKPSAPG LRALFAEDE
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