Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0878 |
Symbol | |
ID | 4082668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 884626 |
End bp | 885405 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638009239 |
Product | response regulator receiver protein |
Protein accession | YP_615929 |
Protein GI | 103486368 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGAAA TGGTCCTGAG CGAGCGCGAG GGTGCCCTGC GCATCCTGAC GCTGAACCGC GCCGAGCGGC ACAATGCGAT GGACGATGCC ATGTCGGCGC TGTTTCAGCG CCTGCTTGGC GAGGCACTTG ACGAAGACAC CACAAATGCC GTGCTGATCC GCGCGGCGGG CAAGAGCTTT TGCTCTGGCC GCGATACCAG CGTGCTGGGC CATCGGGCGC GCGATGAAAG CGATTTTCAT TTCGTCCGCC GCGCCCAGGA AGGACGCCTG CGTATGCAGG AATCGACCAA GCCGATCGTC GCTGCGCTCA AGGGGGGCGT TATCGGCGGC GGGTGCGAAC TGGCACTCGC CGCCGATATT CGGGTGGCCG ATACGACGCT GAAAATGGCC TTGCCGGAGA TTTTATATGG CGTGTTGCCC GATACCGGGG GGACGCAGAT GATGACCGCG CTGGTGGGTC CGTCGCGAAC CAAATATCTG GTGTTGACCG GACGCCCCAT CGACGCCGCA ACCGCGCTGG AATGGGGTGC GGTCGATTTC GTTGTCTCGC CCGAAGAACT GGACGCAAGG GCGCTGGACA TCGCCCGCGA CATAGCCGCC AAACCGCCGA TCAATCTGGC GATGGGCAAG GAGATGATCA ACCTGATGCA CGGCCCCGCG ATCCGCACCG GGACGCGCGC CGAGCTTTAT GCGCAAAGCT ATCTGTTCCA GACCGAAGAT TATCGGGAAG CCCGCACGGC GCTGCGCGAA CGGCGCCAAC CCCGGTACAG GGGGAAATAG
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Protein sequence | MSEMVLSERE GALRILTLNR AERHNAMDDA MSALFQRLLG EALDEDTTNA VLIRAAGKSF CSGRDTSVLG HRARDESDFH FVRRAQEGRL RMQESTKPIV AALKGGVIGG GCELALAADI RVADTTLKMA LPEILYGVLP DTGGTQMMTA LVGPSRTKYL VLTGRPIDAA TALEWGAVDF VVSPEELDAR ALDIARDIAA KPPINLAMGK EMINLMHGPA IRTGTRAELY AQSYLFQTED YREARTALRE RRQPRYRGK
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