Gene Sala_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0878 
Symbol 
ID4082668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp884626 
End bp885405 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content63% 
IMG OID638009239 
Productresponse regulator receiver protein 
Protein accessionYP_615929 
Protein GI103486368 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGAAA TGGTCCTGAG CGAGCGCGAG GGTGCCCTGC GCATCCTGAC GCTGAACCGC 
GCCGAGCGGC ACAATGCGAT GGACGATGCC ATGTCGGCGC TGTTTCAGCG CCTGCTTGGC
GAGGCACTTG ACGAAGACAC CACAAATGCC GTGCTGATCC GCGCGGCGGG CAAGAGCTTT
TGCTCTGGCC GCGATACCAG CGTGCTGGGC CATCGGGCGC GCGATGAAAG CGATTTTCAT
TTCGTCCGCC GCGCCCAGGA AGGACGCCTG CGTATGCAGG AATCGACCAA GCCGATCGTC
GCTGCGCTCA AGGGGGGCGT TATCGGCGGC GGGTGCGAAC TGGCACTCGC CGCCGATATT
CGGGTGGCCG ATACGACGCT GAAAATGGCC TTGCCGGAGA TTTTATATGG CGTGTTGCCC
GATACCGGGG GGACGCAGAT GATGACCGCG CTGGTGGGTC CGTCGCGAAC CAAATATCTG
GTGTTGACCG GACGCCCCAT CGACGCCGCA ACCGCGCTGG AATGGGGTGC GGTCGATTTC
GTTGTCTCGC CCGAAGAACT GGACGCAAGG GCGCTGGACA TCGCCCGCGA CATAGCCGCC
AAACCGCCGA TCAATCTGGC GATGGGCAAG GAGATGATCA ACCTGATGCA CGGCCCCGCG
ATCCGCACCG GGACGCGCGC CGAGCTTTAT GCGCAAAGCT ATCTGTTCCA GACCGAAGAT
TATCGGGAAG CCCGCACGGC GCTGCGCGAA CGGCGCCAAC CCCGGTACAG GGGGAAATAG
 
Protein sequence
MSEMVLSERE GALRILTLNR AERHNAMDDA MSALFQRLLG EALDEDTTNA VLIRAAGKSF 
CSGRDTSVLG HRARDESDFH FVRRAQEGRL RMQESTKPIV AALKGGVIGG GCELALAADI
RVADTTLKMA LPEILYGVLP DTGGTQMMTA LVGPSRTKYL VLTGRPIDAA TALEWGAVDF
VVSPEELDAR ALDIARDIAA KPPINLAMGK EMINLMHGPA IRTGTRAELY AQSYLFQTED
YREARTALRE RRQPRYRGK