Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0873 |
Symbol | |
ID | 4082663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 880353 |
End bp | 880913 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009234 |
Product | TetR family transcriptional regulator |
Protein accession | YP_615924 |
Protein GI | 103486363 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACAA AGATTGACCT GCGGCCGCGC GATGCCGACC GGACGCGCGA AGCGATATTG CAGGCAGCGC AGCAGGTGTT TGCCGAGAAA GGTTTCGCCG CAGCGACGAT ACGCGACATC ACTGCGCGTG CCGGGGTGAA CCAGTCGCTC GTCAGCCGCT ATTTCGGGGG CAAGCTCAAA TTGTTCGAGG CCGCGCTGGA GGCGGCGCTG GACGCGCGGT TGATGACCGA CCTGCCGAAA GCCCGATTCG GCAAGCTTAT CGTGGCGCGC TTCGCCGACG GGGACGGGCG CGTCAGCCCC CTGCCGATGC TGTTTCGCGC AGCCGCCGAC GCCGAAGCGC GCGTCGTGGC GCAGCGGTTG CTGCACGAAA GGGTGTTCGA ACCGCTGGCG CGGTGGATCG GCGGGGCCGA TGCCAGCGTT CGCGCGGCGC GTTTGATGAT GATCTCGCTC GGCTTCTTTA CGTACCGCGA ACAGCTTCCG CTGGCCGGGT TTGCAGGCGC GGTCGATCCC GACCTGCGCC GCTGGCTGGA GGATGAGTTT CAGGCGATCG TCGACAACTG A
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Protein sequence | MATKIDLRPR DADRTREAIL QAAQQVFAEK GFAAATIRDI TARAGVNQSL VSRYFGGKLK LFEAALEAAL DARLMTDLPK ARFGKLIVAR FADGDGRVSP LPMLFRAAAD AEARVVAQRL LHERVFEPLA RWIGGADASV RAARLMMISL GFFTYREQLP LAGFAGAVDP DLRRWLEDEF QAIVDN
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