| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0868 |
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| Symbol | |
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| ID | 4082658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 874496 |
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| End bp | 875272 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638009229 |
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| Product | regulatory protein GntR, HTH |
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| Protein accession | YP_615919 |
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| Protein GI | 103486358 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGATGG ATAATGGCAA CGCGCGAATC CGGGTTCCGA AAACGTCGGA ACTGGTCGCC
GACCAGATCA GGGCGCAAAT CATCCGCGGC GAACTTCAGG AAGGTGACTC GCTGCCCCCC
GAAGGAACGT TGATGGCGAC CCTGGGCATT TCGCGCCCGA CGCTGCGCGA AGCCTTTCGC
ATCCTGGAGG CGGAAAGTCT GATCAGCGTG GTGCGCGGAT CGCGAAGCGG CGCGCGGGTG
CATCAACCCT CCACCGAACT TGTGTCCCGC TACGCCGGAT ATGTGCTGGA ATCGCAAGGG
ACGACCATCG CCGATCTGTA TGCGGCGCGG CTGGCGATCG AACCCACTGT CGTGCGCTGG
CTTGCGACAT CGAAGGGGCA GACCCCCGGC ATGGCACGGG TGAAGGACAT ATTGGCCGAA
CTGGAGGATA TGCTCCAGAC CGACCGCCAC GCCGAGTTCG TCGACAATAT CGCGGTTTTT
CACCAGGCCT TGGTCGAAGC GACGGGCAAC AACACGCTGA GTTTCATGAA CCGGATGTTG
CTCAACCTCG CACGCAATCA TCAGAATGAT TATCAGCGCC GCCATCCGCG ATCGAACGAG
GAGAAGTACA AGAGCCTGCG CGCCGGTTTC AAATCCTATG TCAAACTGGT CAAGATGATC
GAAGAAGGCG ATGTCGAAGG CGCGGTGGCG CACTGGCGCC TTCACCTTCG CAACGCCAAT
GAAACCTGGG CGCAGCGCGG TGAGGGCGAG CGGATCGTCG ATTCCCTGCA CGCATGA
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| Protein sequence | MQMDNGNARI RVPKTSELVA DQIRAQIIRG ELQEGDSLPP EGTLMATLGI SRPTLREAFR
ILEAESLISV VRGSRSGARV HQPSTELVSR YAGYVLESQG TTIADLYAAR LAIEPTVVRW
LATSKGQTPG MARVKDILAE LEDMLQTDRH AEFVDNIAVF HQALVEATGN NTLSFMNRML
LNLARNHQND YQRRHPRSNE EKYKSLRAGF KSYVKLVKMI EEGDVEGAVA HWRLHLRNAN
ETWAQRGEGE RIVDSLHA
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