| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0867 |
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| Symbol | |
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| ID | 4082657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 873534 |
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| End bp | 874394 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009228 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_615918 |
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| Protein GI | 103486357 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC GACTGCGTCT CGACGGACAG GCGGCGTTCG TGACCGGCGG CGGGGGCGGT
ATCGGCCGCG CCATTGCGAT CCGGCTGGCC GAAGCAGGGG CGAATGTTGC GATCCTGGAC
ATTATTGCGG AACGGGCGGA GGAAACGGCG ACCCGCATCC GCGAGACGGG CGCGCGCGCG
CTGACGTTTC CCGCCGACGT CATGGAGAGT GATGCCCTCC GCGCGGCGAT TGACCAGGCG
GCCGCCGCAT TCGGACGGCT CGACATTTTG GTCAACAATG CGGGCGGCGT GTCGGCGCGA
CCCTTTCTCG AACAAAGCGA ACGTTCGATG CGAAAGCATA TCGACATCAA CCTGATGTCG
ATGCTGGTGG CGACGCAGGC GGCGGCCCGG CATATGGTTG CGGGCGGAAA AGGCGGTTCG
ATCATCAACG TCGCCAGTAT CGAGGCGACC CGCGCGGCGC CGAATTTCGC GGTCTATGCG
GCGTGCAAGG CAGGGATGTT CAGCTTCACC CGGTCGATGG CGCTCGAATT GTCGGGCCAT
GGCATTCGCG TCAATTGCCT GGCCCCCGAT CACACGGTCA CGCCGGGCAA TCAGGGAAAT
CGCGCCGGGC CGGTCGATCC CGCGACATGG CGCCAGCGCA GCGACGATGA GGTCGATGCG
ATGAATCGCC TTATCCCGCT TGGCCGCGAA GGCATCGACA TGGAATGCGG CGACGCGGCG
CTTTTCCTGT CGAGCAGGAT GGCGAGCTAT ATCACGGGCA TCCTCCTGCC GGTTGATGGC
GGAACCTGGG CTTCGTCGGG CTGGGTGCGC GGTCAGACGG GCAAATGGAC CTTGAACGAG
GGATTGTCCT TTGGGGGCTG A
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| Protein sequence | MTDRLRLDGQ AAFVTGGGGG IGRAIAIRLA EAGANVAILD IIAERAEETA TRIRETGARA
LTFPADVMES DALRAAIDQA AAAFGRLDIL VNNAGGVSAR PFLEQSERSM RKHIDINLMS
MLVATQAAAR HMVAGGKGGS IINVASIEAT RAAPNFAVYA ACKAGMFSFT RSMALELSGH
GIRVNCLAPD HTVTPGNQGN RAGPVDPATW RQRSDDEVDA MNRLIPLGRE GIDMECGDAA
LFLSSRMASY ITGILLPVDG GTWASSGWVR GQTGKWTLNE GLSFGG
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