Gene Sala_0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0849 
Symbol 
ID4079985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp856522 
End bp857250 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID638009210 
ProductIstB-like ATP-binding protein 
Protein accessionYP_615900 
Protein GI103486339 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.152009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.951242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGGC ATGAGATGAT CGAGGCGATG CGCTCGCTCG GCCTCAAGGG CATGGCAGGA 
GCCTTCGACG AGGCGGTCAC CACCGGGTTG CAGCGCAAGC GCACGACCCA CGAGATCCTG
ACCGATCTGT TGCGCGCCGA AGCCGCGCAT CGTCATGCCG CCTCGATCCG TTACCGCATG
ACCGCAGCCA AGCTGCCGGT AATCAAGGAC CTCGACGCCT TCGCGTTCGA GGGCACCCCG
ATCAACGAAG AGCTGGTGCG CTCCCTGCAC ACAGGTTCGT TCCTGCCCGG TCGCCGCAAC
ATCGTGCTCA TCGGCGGCAC AGGGACCGGC AAGACCCATC TGGCCACTGC GATCACCGCC
AGCGTCGTGC GTGCCGGGGC CCGCGGGCGC TACTTCAACA CGGTCGATCT CGTCACCAGG
CTCGAGGAAG AAGCCCGCAT CGGCAAGGCC GGCTCCATCG CCGCCCAGCT CGGCAGGCTC
GACCTCGTGG TGCTTGATGA GCTGGGCTAT CTGCCGTTCG CCCGATCCGG CGGGCAGCTC
TTGTTCCACC TGATCAGCAA GCTCTACGAG CAGACCTCGG TCATCATCAC CACCAACCTG
GCCTTCGGCG AGTGGCCCAC CGTGTTCGGC GATCCCAAGA TGACCACCGC GCTGCTCGAC
CGCATCACCC ACCATTGCGA TATCGTCGAG ACAGGCAACG ACAGCTGGCG CTTCAAAAAC
CGCAGCTGA
 
Protein sequence
MQRHEMIEAM RSLGLKGMAG AFDEAVTTGL QRKRTTHEIL TDLLRAEAAH RHAASIRYRM 
TAAKLPVIKD LDAFAFEGTP INEELVRSLH TGSFLPGRRN IVLIGGTGTG KTHLATAITA
SVVRAGARGR YFNTVDLVTR LEEEARIGKA GSIAAQLGRL DLVVLDELGY LPFARSGGQL
LFHLISKLYE QTSVIITTNL AFGEWPTVFG DPKMTTALLD RITHHCDIVE TGNDSWRFKN
RS