| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0846 |
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| Symbol | |
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| ID | 4080055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 853625 |
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| End bp | 854443 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009206 |
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| Product | RNA methyltransferase TrmH, group 3 |
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| Protein accession | YP_615897 |
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| Protein GI | 103486336 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.139402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.265264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAC GAGGCTTGCC TGTCAATGGC AGTCATGGGA AAGGCGCGGC CATGAGACAA
TTTTCCCGTC ACCGCCGCCC GTCAGGCGGA AATCAGCGCG GACAGACCGT GCGCTTCTGG
GGCCGCCATG CCGTCCTCGC CGCGCTCGCC AACCCTGACC GCGCGGTCAG GCGCATCTGG
GGCACGCGCG AGGCGCTCGG CCAGCTCGAC CTGCCGCCGG TGATCCCGAT CAGCTATGCC
GATGTCGCCG ATCTGGCGCG CCTGGTCGCG CGCGACGCGC CGCATCAGGG TCTGGTGATC
GAGGTCGACC CGCTCGACGG CGTGCATCTC GGCGACCTTT TGCAGGAAGA GGTCGACGCC
GAAAGCAGGC GCCCGCTCGT CATCCTCGAT CAGGTCACCG ACCCGCACAA TATCGGCGCG
GTGCTGCGCT CGGCGGCGGC GTTCGACGCC GCCGCGATCG TCACGCAGGA CCGGCACAGC
CCGCCCGAAA GCGGCGTCAT CGCGCGCTCG GCGTCGGGCG CGCTCGAAAC CGTGCCGTGG
GTGCGCGTCG TCAACCTGTC GCGCGCGCTG GAGGAAATCG CCGAGGCGCA ATATTGGCGC
ATCGGGCTGA TGGGCGATAC CGAAACGACG CTCGGCGAAA CGCTCGACGG CAGCAAGGTC
GCACTGGTGC TCGGCTCCGA AGGCGACGGG ATGCGGCACA ATGTGATGGA GCATTGCGAC
GTGCTGGCGC GGCTCCCCAT CTCGCCACGG ATGGAAAGCC TCAACATCTC GAACGCCGCG
GCGATCGCGC TCTACGCGGT GGCGACGGCG AGTAAATAA
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| Protein sequence | MAKRGLPVNG SHGKGAAMRQ FSRHRRPSGG NQRGQTVRFW GRHAVLAALA NPDRAVRRIW
GTREALGQLD LPPVIPISYA DVADLARLVA RDAPHQGLVI EVDPLDGVHL GDLLQEEVDA
ESRRPLVILD QVTDPHNIGA VLRSAAAFDA AAIVTQDRHS PPESGVIARS ASGALETVPW
VRVVNLSRAL EEIAEAQYWR IGLMGDTETT LGETLDGSKV ALVLGSEGDG MRHNVMEHCD
VLARLPISPR MESLNISNAA AIALYAVATA SK
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