| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0843 |
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| Symbol | tig |
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| ID | 4080052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 850774 |
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| End bp | 852408 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009203 |
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| Product | trigger factor |
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| Protein accession | YP_615894 |
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| Protein GI | 103486333 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.793444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0950155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCAAGG ATAAGACCAA GGCAATGAAG ACCGTCGAAA CGCTGAACGA AGGCCTGAAG
CGCGAATATC GCGTCACCAT CACCGCCAAG GATATCGACG CGCGCGTCGA CGAAGAGGTG
AAGAGCATCG CCCCGACCGT CCGCATGCCC GGTTTCCGCC CCGGCAAGGT GCCGCCCAAC
CTCATTCGCA AGATGCACGG CGCCGCGCTG TCGGCCGACG CGCTCAACAA GGCGATCGAC
GCCGGCGTGC GCGACCTGAT GGCGAAGGAA AAGCTGCGCC CGGCGCTCCA GCCCGCGGTG
ACGCTGGCCG ACGGTTATGA AGCCGGCAAG GATGCCGAGT TGACCGTCGC GCTGGAAGTG
CTGCCGGAAA TCGAAACGCC GTCGATCGAC GGGCTGAAGC TCGAGCGGCT GACCGTTCCC
GCCGACGACA AGGCGGTGAT GGCGAAGATC GAGGAATTCG CCGCGCAGAT GAAGCGCTTC
GAAGAAGCGC CGAAGACCAG GAAGGCCGCG ACCGGCGATC AGGTCATCAT CGACTTTGCC
GGCAGCGTCG ACGGCACCCC CTTCGACGGC GGCACGGGCG AGGATATGGC GGTCGAAATC
GGTTCGGGCC AGCTGATCCC CGGTTTCGAG GACCAGCTCG TCGGCGTCAA GGCGGGCGAC
GAAAAAACGT TGAAGGTCAC GTTCCCGGAA GACTATCCGG TCGAGACCCT GAAGGGCAAG
CTGGCCGAAT TCGCCGTGAC GGTGAAGGAA GTGAAGGTTC CCGCCGCGAC GAAGATCGAC
GACGAATTTG CCAAGTCGCT CGGCCTCGAA AGCCTCGACA AGCTCAAGGA GCTGATGAAG
GATCAGGTCG AGCAGGAACT CAACGGCCTG ACCCGCACCC ATATGAAGCG CAAGCTGCTC
GACCAGCTCG CCGCCGCCCA TGACTTCGAG GTGCCGCCGA CGATGGTCGA GGCCGAGTTC
AACCAGATCT GGCAGCAGCT CGAGCATGAA GCGAGCCACG AGGAAGATCC CGAAGCGGCG
AAGGCCGAGC TGGAGAACGA CCGCGAGGAA TATCGTGCCA TCGCGGTGCG CCGCGTCCGC
CTGGGCCTGC TCCTCTCCGA AATCGGCCAG GCGCATGGCG TGCAGGTCTC TCAGCAGGAG
ATGCAGCGCC TGATCATGCA GGCGGCGCAG CAGTATCGGC CCGAGGATCG CCAGCGGTTC
GTCGAATATG TCCAGCAGGA CGCGCTCGCC GCCGCGCAGC TCCGCGCCCC GCTCTATGAA
GACAAGGTCG TCGACTTCCT GTTTGAAAAG GCCGAAATCA CCGACCGCGA AACGACGCGC
GAGGAACTGG AGGCGGCGAT CGAGGCCGAC GACGACAGCG GTCATGTCCA CGGACCGGGC
TGCGGCCACG ACCATGACGA AAAACCGGCC AAGAAGGCGG CGGCGAAGAA GCCCGCCACC
AAGAAGGAAG CGGTGAAGGA CGAGGCCAAG GCCGAGGAAG CCCCCGCCAA GAAGGCGCCG
GCGAAAAAGG CCGAGCCCAA GGCCGAAGCC AAACCCGCCG CGGCAAAGAA GGCCGCGCCG
GCCAAGGCTG CGGCCGAGGA AAAGGCCGAG CCAGCGAAGA AGGCGCCCGC CAAAAAGGCT
GCGGCGAAGA AATAG
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| Protein sequence | MSKDKTKAMK TVETLNEGLK REYRVTITAK DIDARVDEEV KSIAPTVRMP GFRPGKVPPN
LIRKMHGAAL SADALNKAID AGVRDLMAKE KLRPALQPAV TLADGYEAGK DAELTVALEV
LPEIETPSID GLKLERLTVP ADDKAVMAKI EEFAAQMKRF EEAPKTRKAA TGDQVIIDFA
GSVDGTPFDG GTGEDMAVEI GSGQLIPGFE DQLVGVKAGD EKTLKVTFPE DYPVETLKGK
LAEFAVTVKE VKVPAATKID DEFAKSLGLE SLDKLKELMK DQVEQELNGL TRTHMKRKLL
DQLAAAHDFE VPPTMVEAEF NQIWQQLEHE ASHEEDPEAA KAELENDREE YRAIAVRRVR
LGLLLSEIGQ AHGVQVSQQE MQRLIMQAAQ QYRPEDRQRF VEYVQQDALA AAQLRAPLYE
DKVVDFLFEK AEITDRETTR EELEAAIEAD DDSGHVHGPG CGHDHDEKPA KKAAAKKPAT
KKEAVKDEAK AEEAPAKKAP AKKAEPKAEA KPAAAKKAAP AKAAAEEKAE PAKKAPAKKA
AAKK
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