| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0842 |
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| Symbol | gatB |
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| ID | 4080050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 848780 |
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| End bp | 850255 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009201 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_615893 |
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| Protein GI | 103486332 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.261739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0872982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATGA TGAGTGATTA TCGAGTGCAG GGCGAAACCG GCGAGTGGGA GGTCGTGATT
GGCCTCGAGG TCCACGCCCA GATCACGACC AACGCCAAGC TGTTTTCGGG CGCCGCGACG
GCGTTTGGCG CCGAGCCGAA CACGCAGGTG TCGCTGGTCG ACGCTGCGAT GCCGGGGATG
CTGCCGGTGC CGAACCGCGA GTGCATCCGC CAGGCGGTGC GCACGGGGAT GGCGATCGAG
GCGCAGATCA ATCGCTGGTC GCGGTTCGAC CGCAAGAATT ATTTCTATGC CGACCTGCCG
CAGGGCTATC AGATTTCGCA GCTTTATCAT CCGCTGGTCG GCGAAGGTTC GCTGACGATC
GCCGCCGATG AAAAGGCCGG GATTCCCGCC GACAAGGTGA TCGGGATCGA GCGTATCCAT
GTCGAACAGG ATGCGGGGAA GCTGATGCAC GACCAGCATC CGACGATGTC CTATGTCGAT
TTGAACCGCA GCGGGGTCGC GTTGATGGAG ATCGTGTCGA AACCCGACAT GCGCTCGCCC
GCCGAAGCCG GCGCCTATGT GCGCAAGCTG CGCTCGATCC TGCGCTATGT CGGCTCGTGC
GACGGCAATA TGGAAGAAGG CTCGATGCGC GCCGACGTCA ACGTCAGCGT GCGGCGGCCC
GGCGAGGCGT TCGGCACGCG CACCGAGACG AAGAACGTCA ATTCGGTGCG CTTCGTGATG
GCGGTGATCG AGGGCGAGGC GAAGCGGCAG GTCGCGCTGA TCGAGAGCGG CGGCGAGGTG
GTGCAGGAAA CGCGCCTCTA CGATCCCGAC CGGGGCGAGA CGCGGTCGAT GCGGTCGAAG
GAAGACGCGC ATGACTATCG CTACTTCCCC GATCCCGACC TGTTGCCGCT CGAACTCGAC
GACGCCTTTC TCGAAGAATG CCGCGCGAGC CTGCCTGAAT TGCCCGACGC CAAGCGCGCG
CGTTATCTGG CGGCGGGGAT CAGCGCCTAT AACGCCGATG TGCTGACCGC CGAGGTCGAG
GCGGCGCGCT GGTTCGACGC GCTGCTCGAA GCCGGCGCAA AGCCCGTCGC GGCGGCGAAC
TGGGTGACGA GCGAGCTGTT CGGCGCCTTG AACCGGCTCG GTCGCGACAT TTCGGATTCG
CCAGTCAGTC CGGCGCAGGC CGCCGAATTG CTCGGCCTCG TCGCCGATGG CACGATTTCG
GGGACGATTG CGAAACAGGT ATTCGAAAAG ATGCTCGAAA GCGGCGACGG CGCCGCGGCG
ATCGTCGATC GTGAGGGCCT CAAGCAGACG AGCGACACGG GCGCAATCGA AGCCGAGATC
GCCAAGGTTC TCGCCGCCAA TGCCGACAAG GTCGAGCAGT ATAAGGGCGG CAAGGAAGCC
CTGTTCGGCT TCTTCGTCGG GCAGACGATG AAGGCGATGC AGGGCAAGGC AAACCCGCAG
GTCGTCAACG AGCTGCTGAA AAAGGCACTG GGCTGA
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| Protein sequence | MRMMSDYRVQ GETGEWEVVI GLEVHAQITT NAKLFSGAAT AFGAEPNTQV SLVDAAMPGM
LPVPNRECIR QAVRTGMAIE AQINRWSRFD RKNYFYADLP QGYQISQLYH PLVGEGSLTI
AADEKAGIPA DKVIGIERIH VEQDAGKLMH DQHPTMSYVD LNRSGVALME IVSKPDMRSP
AEAGAYVRKL RSILRYVGSC DGNMEEGSMR ADVNVSVRRP GEAFGTRTET KNVNSVRFVM
AVIEGEAKRQ VALIESGGEV VQETRLYDPD RGETRSMRSK EDAHDYRYFP DPDLLPLELD
DAFLEECRAS LPELPDAKRA RYLAAGISAY NADVLTAEVE AARWFDALLE AGAKPVAAAN
WVTSELFGAL NRLGRDISDS PVSPAQAAEL LGLVADGTIS GTIAKQVFEK MLESGDGAAA
IVDREGLKQT SDTGAIEAEI AKVLAANADK VEQYKGGKEA LFGFFVGQTM KAMQGKANPQ
VVNELLKKAL G
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