| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0841 |
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| Symbol | gatA |
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| ID | 4080049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 847208 |
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| End bp | 848689 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009200 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_615892 |
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| Protein GI | 103486331 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.766773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0823385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC TGACCAATTT GACCGTCGCG CAGATCCGCG ACGGGCACCG CGCGGGCGAT
TTTTCCGCCG TTGAAGTGGC CGAGGCGTTC AACGCCAATG TCGCAGCGGC GAAGGCGCTC
AATGCGTTTA TCGTCGAGAC GCCCGATCTT GCGATCGAAG CCGCGAAGGC GGCCGATGCC
GACCGCGCGG CGGGGACGCT GAAACCGCTG TCGGGCGTGC CGATCGGCAT GAAGGACCTG
TTCTGCACCA ACGGCGTGCA GACGACGGCC GCGAGCCACA TGCTCGAAGG CTTCGTGCCG
CGCTATGAAT CGACCGTCAG CCAGAAATTG TGGGACGCGG GCGCGGGGAT GCTGGGCAAG
CTCAACCTCG ACCAGTTCGC GATGGGGTCG TCGAACGAGA CGAGCTATTT CGGCAACGTC
ATCAGCCCGT GGCGGCGCAA CGACGGCGGC AATGCCGCGC TCGCGCCGGG CGGCTCGTCG
GGCGGCTCGT CGGCGGCGAT CGCGGCGCGG CTGTGCCCCG CGGCGACGGG GACCGACACC
GGCGGGTCGA TCCGCCAGCC CGCGGCCTTC ACCGGCATTT CAGGGATCAA GCCGACCTAT
GGCCGCTGTT CGCGCTGGGG CATCGTGGCG TTCGCCAGCT CGCTCGACCA GGCGGGGCCG
ATGGCGCGGA CGGTGCGCGA CTGCGCGATC ATGCTCGAAA ATATGGCGGG CTTCGATCCG
AAGGACGCGA CCAGCCTCGA TCTGCCGGTG CCGAATTGGG AAGCGGCCTT GTCGAGCGAT
TTGAGGGGCA AGACGGTTGG TATTCCCAGG GAATATCGGC TGGAGGGTAT CGACCCCGAC
ATCGACGCGA TGTGGGACGC CGGGATCGCG ATGCTGAAGG ATGCGGAGGC CGCGGTCGTC
GAGATCAGCC TGCCGCATAC CAAATATGCG CTGCCCGCCT ATTATATCAT CGCGCCCGCC
GAGGCGTCGT CGAACCTCGC GCGCTATGAC GGCGTGCGCT ATGGCCTCCG CGATCTGCCG
CAGGGCGCGG GGTTGCAGGA CATGTACGCC GCGACGCGCG CCGAGGGCTT CGGGGCGGAG
GTCAAGCGCC GCATCATGAT CGGCACCTAT GTTCTGTCGG CGGGCTTCTA CGACGCCTAT
TATACGCAGG CGCAGAAGGT GCGGACGCTG ATCGCGCGCG ATTTCGAGGC GGCTTTTGGC
TCGTGCGACG TGATCCTCGC GCCGACCGCG CCGTCGGCGG CGTTCGGGCT GGGCGAGAAG
ATGGCCGATC CGCTGGCGAT GTATTTGAAC GACGTGTTCG CGGTGCCCGC GAGCCTCGCG
GGGCTGCCCG CGATGTCGGT CCCCGCGGCG CTGAACCGCG AAGGGCTGCC GCTGGGTTTG
CAGATCATCG GCAAGCCGTT CGACGAGCAG GGGGTGCTGA ACGCCGGGCT GGCGATTGAA
GAGCGCGCCG GGTTCACGGC GCGGGCGGAG AAGTGGTGGT GA
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| Protein sequence | MTELTNLTVA QIRDGHRAGD FSAVEVAEAF NANVAAAKAL NAFIVETPDL AIEAAKAADA
DRAAGTLKPL SGVPIGMKDL FCTNGVQTTA ASHMLEGFVP RYESTVSQKL WDAGAGMLGK
LNLDQFAMGS SNETSYFGNV ISPWRRNDGG NAALAPGGSS GGSSAAIAAR LCPAATGTDT
GGSIRQPAAF TGISGIKPTY GRCSRWGIVA FASSLDQAGP MARTVRDCAI MLENMAGFDP
KDATSLDLPV PNWEAALSSD LRGKTVGIPR EYRLEGIDPD IDAMWDAGIA MLKDAEAAVV
EISLPHTKYA LPAYYIIAPA EASSNLARYD GVRYGLRDLP QGAGLQDMYA ATRAEGFGAE
VKRRIMIGTY VLSAGFYDAY YTQAQKVRTL IARDFEAAFG SCDVILAPTA PSAAFGLGEK
MADPLAMYLN DVFAVPASLA GLPAMSVPAA LNREGLPLGL QIIGKPFDEQ GVLNAGLAIE
ERAGFTARAE KWW
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