| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0840 |
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| Symbol | gatC |
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| ID | 4080048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 846906 |
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| End bp | 847208 |
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| Gene Length | 303 bp |
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| Protein Length | 100 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638009199 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit C |
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| Protein accession | YP_615891 |
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| Protein GI | 103486330 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
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| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.643343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.123251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATCG ATCAGGCAAC AGTGAGGAAA ATCGCGTCGC TGGCGCGCAT CGCGATCAGC
GATGCCGAAG CCGCCGCGAT GGAAGGCGAA TTGAACGGCA TTCTGGGCTG GGTCGAACAA
CTCGGCGAGG TGGATGTGAG CGGGGTCGAA CCGATGACCG CGGTGATCCC GAACACGCTC
CGCCTGCGCG ACGATGTCGT CGACGCCGAC CCGCTGACCG GCGGCAACCG CCGCGACGAT
ATTCTCGCCA ATGCGCCGGC GGCGATGCAC GGCTTTTTCG GCGTGCCGAA AGTGATCGAA
TAA
|
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| Protein sequence | MAIDQATVRK IASLARIAIS DAEAAAMEGE LNGILGWVEQ LGEVDVSGVE PMTAVIPNTL
RLRDDVVDAD PLTGGNRRDD ILANAPAAMH GFFGVPKVIE
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