| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0836 |
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| Symbol | trpD |
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| ID | 4080044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 842002 |
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| End bp | 843000 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638009195 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_615887 |
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| Protein GI | 103486326 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0270172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00485559 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCGGT TCGGGCCATT TCCCGACCCT TCGGCGCTGC TCGACCATGA CGAGGCGGCG
CACGCCTTCG CAACGATGCT CGATGGCGGT GCGCGCGACG AACAGATCGC CGCGTTTCTG
GTCGCGCTCG CCGACCGCGG CGAAACGATG GTCGAAATCG CCGCCGCGGC ACAGGCGATG
CGCGATCGGC TGATCCCCAT CGAGGCGCCG GCGGGCGCGA TCGACGTGTG CGGCACCGGC
GGCGACGGAC ACCACACGCT CAACGTCTCG ACGGCGGTGT CGATCGTCGT CGCGGCGTGC
GACGTGCCGG TCGCAAAGCA CGGCAATCGC GCGGCTTCGT CGAAATCGGG CGCCGCCGAC
ACGCTGGAGG CGCTTGGCCT CGACATGGAG CGCGCCGATC GTCAGGCGCA GGAACAGCTC
GCCGACCTCG GCATCTGTTT CCTCTTCGCC GGGACGCGCC ACCCTGCGAT GAAGCGCATC
ATGCCGATCC GCAAGGCGAT CGGGCGGCGG ACGATCTTCA ACCTGATGGG GCCGCTCGCC
AATCCCGCGC GCGTCACCCG CCAGCTTGTC GGCATCGCGC GCCCCGCCTA TGTGCCCGTC
TATGCCGAGG CGCTGCACCG GCTCGGCACC GATCATTCGC GCGTCATTTC GGGCGACGAG
GGGCTCGACG AACTCTCGCT CGCGGGCGGC AACGAGGTCG CGGTGGTGAC CCCCGACGGC
GTGCGGATGC AGCGCAGCAG CGCCGCCGAC GCCGGGCTGC CGACGCGCTC GCTCGCCGAA
ATCCGCGGCG GCGATGCGGC GTTCAACGCC CGCGCGCTGC GCCGCCTGCT CGAAGGCGAA
ACCGGCGCGT ACCGTGACGC GGTACTCTAC AACGCCGCCG CGGCGCTGAT CGTCGCGGGC
GCGGTCGACA CGCTGACGGA GGGGGTCGAG GAAGCCGCCG AAGCGATCGA CAAGGGCCTC
GCCAACGCGC TGCTCAACTG CTGGATCGCG TATAAATGA
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| Protein sequence | MSRFGPFPDP SALLDHDEAA HAFATMLDGG ARDEQIAAFL VALADRGETM VEIAAAAQAM
RDRLIPIEAP AGAIDVCGTG GDGHHTLNVS TAVSIVVAAC DVPVAKHGNR AASSKSGAAD
TLEALGLDME RADRQAQEQL ADLGICFLFA GTRHPAMKRI MPIRKAIGRR TIFNLMGPLA
NPARVTRQLV GIARPAYVPV YAEALHRLGT DHSRVISGDE GLDELSLAGG NEVAVVTPDG
VRMQRSSAAD AGLPTRSLAE IRGGDAAFNA RALRRLLEGE TGAYRDAVLY NAAAALIVAG
AVDTLTEGVE EAAEAIDKGL ANALLNCWIA YK
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