Gene Sala_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0828 
Symbol 
ID4080474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp832310 
End bp832618 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content66% 
IMG OID638009187 
Productantibiotic biosynthesis monooxygenase 
Protein accessionYP_615879 
Protein GI103486318 
COG category[S] Function unknown 
COG ID[COG1359] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0989333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0109928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCA TCACCAGCCA CGTCATCCAC ACCCCCGAAC ATCGCGAGCG CATGATCGCG 
CTCGGGGCCG AGCATAGCGC GCGTTCGCGC GGCGAGGCGG GGTGTCTGGG GCATCATTGT
CATATCGATG TCGAGAGTGA CCTGCGGCTC GTCTTTGTCG AAGACTGGGA GAGCGTCGAG
GCCGTGCGCG CGCATTTTGC GCTGCCCGCG TCGCGCGCCT TCGTCGCGGA GATGCGCGCG
CTGTCGCCCG AACCGCCGGT GATCCGCATT TATGCGGCGG AAGACATGAC GGCGACGCCG
ATGGGGTAA
 
Protein sequence
MILITSHVIH TPEHRERMIA LGAEHSARSR GEAGCLGHHC HIDVESDLRL VFVEDWESVE 
AVRAHFALPA SRAFVAEMRA LSPEPPVIRI YAAEDMTATP MG