| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0826 |
|---|
| Symbol | |
|---|
| ID | 4080472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 830073 |
|---|
| End bp | 831134 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638009185 |
|---|
| Product | phosphate binding protein, putative |
|---|
| Protein accession | YP_615877 |
|---|
| Protein GI | 103486316 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR02136] phosphate binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.320432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0147746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGA CATTCGCTCC CAAGATGCTT GGCGTCGCTG GCGCCGCGAC GTGCGCGCTG
GCGCTTTCCG CGTGCCAGGA TCAGGCGTCT TCGGGTGGCG GCGCGCGCGA TTATATCAGC
GCGGTCGGCT CCTCCACCGT CTATCCCTTT GCCACCGCGG TCGGCGAGAA GTTCGCCGAA
GCGACGGGCA ACAAGACGCC GAAGATCGAT TCGACCGGCA CCGGCGGCGG GTTCGAGCGG
TTCTGCGCCG GCGTCGGCGG CGACACGCCC GACATCGCGA ACGCATCGCG CCGCATCAAG
AAAAAGGAGT TCGACACCTG CGTCGCCAAT GGCGTGAAGG ACATCGTCGA AATCCAGATC
GGCATCGACG GCATCGCGCT GGGCGAAGCG ACACGCGGCC CCGGTTTCAA GCTGACCGAA
GAAGATGTCT ATAAGGCGCT CGCCGCCAAC CCCTATGGCA AGCCGAACAC CGCGAAGACG
TGGAAAGACG TCAACCCCGC GCTGCCCGCG GTCGCGATCT CGGTCTTTGG TCCGCCGTCG
ACCAGCGGCA CCTATGATGC GTTCAAGGAG CTGATCCTGG GCCGCGGATG CGACGCGAAC
CCCGAAATGA AGGCGCTGAA GGCCAGCAAC GCCGACGAAC ATGAAGCGAC CTGCACCACG
CTGCGCGGTT CGCCCTATTA TGTCGAGCAG GGCGAGAATG ATAACCTCAT CATCTCGAAG
CTCGACAAGA ACCCGACCAG CCTTGGCATC TTCGGCTTTT CCTATCTCGA TGCGAACAAG
GACAAGATCA AGGCGGTGCC GATCCAGGGC GTCGCGCCCA CTTACGCGGC GATCGCCGAT
GGCAGCTACC CCGGTTCGCG CCCGCTGTTC ATCTATGTGA AGAAGGCGCA TGTCGGCGTT
GTCCCCGGCC TCGCCGAATA TGTCGCCGAG TTCCTGAAGG GCGCGGCCGA CGGCGGGTAT
CTGAACGCCA AGGGGCTGAT CGTGTCGCCC AAGGCCATCG CCGACAAGGC GCGCGCCGCG
GGCACCGCGA TGACCCCGCT GGATGGCAGC GAGCTGAAAT AA
|
|---|
| Protein sequence | MFKTFAPKML GVAGAATCAL ALSACQDQAS SGGGARDYIS AVGSSTVYPF ATAVGEKFAE
ATGNKTPKID STGTGGGFER FCAGVGGDTP DIANASRRIK KKEFDTCVAN GVKDIVEIQI
GIDGIALGEA TRGPGFKLTE EDVYKALAAN PYGKPNTAKT WKDVNPALPA VAISVFGPPS
TSGTYDAFKE LILGRGCDAN PEMKALKASN ADEHEATCTT LRGSPYYVEQ GENDNLIISK
LDKNPTSLGI FGFSYLDANK DKIKAVPIQG VAPTYAAIAD GSYPGSRPLF IYVKKAHVGV
VPGLAEYVAE FLKGAADGGY LNAKGLIVSP KAIADKARAA GTAMTPLDGS ELK
|
|---|
| |