Gene Sala_0824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0824 
Symbol 
ID4080470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp827135 
End bp828391 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content65% 
IMG OID638009183 
Productphosphate ABC transporter permease 
Protein accessionYP_615875 
Protein GI103486314 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.8156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00518788 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAGAG ACACCGCCCC GACCGACTGG AAAGCCGCGG CGATGCAGAA ACGCATCGCG 
GGCCGCTATG CCGCCGAACG CCGGTTCAAG GCGATCGGGC TGGCGGCGGT GCTGCTGTCG
GGCGCGTTCC TGGCGTTTCT GCTGTTCGTG ATGGTCGGCA ACGGCGCGCG CGGCTTTACC
TATACGCATG TTTCGGTGCC GATCGACTTC AAGGCGACGC CGCTCACAAT CGACGCATCG
CGGCTGGACG ATCCCGACGC CGACCAGCTG ATCGCAGGCG CGGGGCTGGC CGATATCGTC
GCCTTTGCCG CCGACGAGGC GCTGGGCGAG GACGGGTCGA AGCTGATCTC CGAAAACGCC
TGGAAAGAGG TGCGCAGCGC GATCAAGGCC GACCCCGAGC TGCTGAACGG CAAAAGCGTG
TTCGAACTGC CCGCGGCGTC CGAAGTCGAC ATCATGGCGA AGGAAGGCGC GCGCGGCGAA
CTGGGCGCGC GGGTCGACGC GCTGGAAAGG GACGGCAGGC TGTCGACCGG CATCCACTGG
CCCTTCTTCA GGAACGCCGA TGCGACCGAC CCCGCGGTCG CGGGCATCTG GGGCGCGCTC
AAGGGATCGG TGCTGACGAT CTTCATCGCC TTCCTGATTG CTTTCCCGAC CGGGGTGCTC
GCGGCGCTCT ATCTGGAAGA ATATGCACCC AAGAACCGGT GGACCGACCT CATCGAAGTG
TCGATCAACA ATCTGGCCGC GGTGCCCTCG ATCATCTTTG GCCTGCTCGC GCTCGCGGTG
TTCATCAACT GGTTCGGCAT CTGTCAGGCG AGCCCGCTCG TCGGCGGGCT GACGCTCGCG
CTGATGACGA TGCCGGTGAT CGTGATCGCC AGCCGCAACG CGATCAAATC GGTGCCGCCG
TCGATCCGCG ATGCCGCGCT GGGCGTCGGC GCCAGTCCGG TGCAGGTCGT GTTCCACCAC
GTCCTGCCGC TTGCCCTCCC CGGCATCCTC ACCGGCACGA TCATCGGCAT GGCGCGCGCG
CTGGGCGAGA CGGCGCCGCT GCTGCTCATC GGGATGCGCG CCTTTATCGG CGACGTGCCG
GGCGGCATCT GTTCGCCCTC GACCGTGCTG CCGATGCAGA TATTCCTCTG GTCGGACGAA
GTCGATCGCG GCTTTGTCGA GAAAACCTCC GCCGCGATCA TCGTGCTGCT GATTGTCCTG
CTGTCGATGA ACGCCTTTGC GATCTATCTT CGCAACAAGT TCGAAAAACG CTGGTGA
 
Protein sequence
MNRDTAPTDW KAAAMQKRIA GRYAAERRFK AIGLAAVLLS GAFLAFLLFV MVGNGARGFT 
YTHVSVPIDF KATPLTIDAS RLDDPDADQL IAGAGLADIV AFAADEALGE DGSKLISENA
WKEVRSAIKA DPELLNGKSV FELPAASEVD IMAKEGARGE LGARVDALER DGRLSTGIHW
PFFRNADATD PAVAGIWGAL KGSVLTIFIA FLIAFPTGVL AALYLEEYAP KNRWTDLIEV
SINNLAAVPS IIFGLLALAV FINWFGICQA SPLVGGLTLA LMTMPVIVIA SRNAIKSVPP
SIRDAALGVG ASPVQVVFHH VLPLALPGIL TGTIIGMARA LGETAPLLLI GMRAFIGDVP
GGICSPSTVL PMQIFLWSDE VDRGFVEKTS AAIIVLLIVL LSMNAFAIYL RNKFEKRW