Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0824 |
Symbol | |
ID | 4080470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 827135 |
End bp | 828391 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009183 |
Product | phosphate ABC transporter permease |
Protein accession | YP_615875 |
Protein GI | 103486314 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0581] ABC-type phosphate transport system, permease component |
TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.8156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00518788 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAGAG ACACCGCCCC GACCGACTGG AAAGCCGCGG CGATGCAGAA ACGCATCGCG GGCCGCTATG CCGCCGAACG CCGGTTCAAG GCGATCGGGC TGGCGGCGGT GCTGCTGTCG GGCGCGTTCC TGGCGTTTCT GCTGTTCGTG ATGGTCGGCA ACGGCGCGCG CGGCTTTACC TATACGCATG TTTCGGTGCC GATCGACTTC AAGGCGACGC CGCTCACAAT CGACGCATCG CGGCTGGACG ATCCCGACGC CGACCAGCTG ATCGCAGGCG CGGGGCTGGC CGATATCGTC GCCTTTGCCG CCGACGAGGC GCTGGGCGAG GACGGGTCGA AGCTGATCTC CGAAAACGCC TGGAAAGAGG TGCGCAGCGC GATCAAGGCC GACCCCGAGC TGCTGAACGG CAAAAGCGTG TTCGAACTGC CCGCGGCGTC CGAAGTCGAC ATCATGGCGA AGGAAGGCGC GCGCGGCGAA CTGGGCGCGC GGGTCGACGC GCTGGAAAGG GACGGCAGGC TGTCGACCGG CATCCACTGG CCCTTCTTCA GGAACGCCGA TGCGACCGAC CCCGCGGTCG CGGGCATCTG GGGCGCGCTC AAGGGATCGG TGCTGACGAT CTTCATCGCC TTCCTGATTG CTTTCCCGAC CGGGGTGCTC GCGGCGCTCT ATCTGGAAGA ATATGCACCC AAGAACCGGT GGACCGACCT CATCGAAGTG TCGATCAACA ATCTGGCCGC GGTGCCCTCG ATCATCTTTG GCCTGCTCGC GCTCGCGGTG TTCATCAACT GGTTCGGCAT CTGTCAGGCG AGCCCGCTCG TCGGCGGGCT GACGCTCGCG CTGATGACGA TGCCGGTGAT CGTGATCGCC AGCCGCAACG CGATCAAATC GGTGCCGCCG TCGATCCGCG ATGCCGCGCT GGGCGTCGGC GCCAGTCCGG TGCAGGTCGT GTTCCACCAC GTCCTGCCGC TTGCCCTCCC CGGCATCCTC ACCGGCACGA TCATCGGCAT GGCGCGCGCG CTGGGCGAGA CGGCGCCGCT GCTGCTCATC GGGATGCGCG CCTTTATCGG CGACGTGCCG GGCGGCATCT GTTCGCCCTC GACCGTGCTG CCGATGCAGA TATTCCTCTG GTCGGACGAA GTCGATCGCG GCTTTGTCGA GAAAACCTCC GCCGCGATCA TCGTGCTGCT GATTGTCCTG CTGTCGATGA ACGCCTTTGC GATCTATCTT CGCAACAAGT TCGAAAAACG CTGGTGA
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Protein sequence | MNRDTAPTDW KAAAMQKRIA GRYAAERRFK AIGLAAVLLS GAFLAFLLFV MVGNGARGFT YTHVSVPIDF KATPLTIDAS RLDDPDADQL IAGAGLADIV AFAADEALGE DGSKLISENA WKEVRSAIKA DPELLNGKSV FELPAASEVD IMAKEGARGE LGARVDALER DGRLSTGIHW PFFRNADATD PAVAGIWGAL KGSVLTIFIA FLIAFPTGVL AALYLEEYAP KNRWTDLIEV SINNLAAVPS IIFGLLALAV FINWFGICQA SPLVGGLTLA LMTMPVIVIA SRNAIKSVPP SIRDAALGVG ASPVQVVFHH VLPLALPGIL TGTIIGMARA LGETAPLLLI GMRAFIGDVP GGICSPSTVL PMQIFLWSDE VDRGFVEKTS AAIIVLLIVL LSMNAFAIYL RNKFEKRW
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