| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0822 |
|---|
| Symbol | |
|---|
| ID | 4080468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 825495 |
|---|
| End bp | 826217 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638009181 |
|---|
| Product | phosphate uptake regulator, PhoU |
|---|
| Protein accession | YP_615873 |
|---|
| Protein GI | 103486312 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.591011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00503775 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAA CGAACGATCA TACGGTCAAA GCCTTCGACG AAGACCTCAA CCGCCTGCGC
GGGCTGATCA GCGAGATGGG CGGTCGCGCC GAACAGGCGC TGCTCCAGGC GATGACGGCG
CTGGGCAAGG GCGACCTCGA CCTCGCGGCG CAGGTCGTGC GCGACGACAG GAAGATCGAC
GCGCTCGAGG CCGAGGTCGA ACAGCTGACG GTGCAGACGA TCGCGCTGCG CGCGCCGATG
GCCGACGATC TGCGCGAAAT GATCGCGGCG CTGAAAATCG TCTCGGTCGT CGAACGCATC
GGCGATTATG CCAAGAATAT CGCCAAGCGA GTCGCGCTGA TGGACCAGAC GCGCTCGATC
GAGGCGATCC CGGTGCTGAT GTCGATGTCG AACATCGTCG CCGAACTGGT CCACGACGCG
CTCGACAGCT TTGCGGCGCG CGACGCCGAA CTGGCGGTGC GGGTGACCGC GCGCGACAAG
AATGTCGACG ATTTCTACAA CAGCATCTTC CGCACGCTCG TCACCTTCAT GATGGAAAAT
CCGAAATATA TTTCGGAAAG CGCGCATTTG CTGTTCGTCG CCAAGAACCT CGAACGGATG
GGCGACCATG CGACCAACAT CGCCGAGATG GTCTATTATG TCGTGACCGG CGAACATATG
GAGGAGCGCG AGCGCGGGGA AACCCCCGAG GAAAGCGCCG CGGCGGAGAA GGAGCAAGGC
TGA
|
|---|
| Protein sequence | MALTNDHTVK AFDEDLNRLR GLISEMGGRA EQALLQAMTA LGKGDLDLAA QVVRDDRKID
ALEAEVEQLT VQTIALRAPM ADDLREMIAA LKIVSVVERI GDYAKNIAKR VALMDQTRSI
EAIPVLMSMS NIVAELVHDA LDSFAARDAE LAVRVTARDK NVDDFYNSIF RTLVTFMMEN
PKYISESAHL LFVAKNLERM GDHATNIAEM VYYVVTGEHM EERERGETPE ESAAAEKEQG
|
|---|
| |