| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0809 |
|---|
| Symbol | |
|---|
| ID | 4080359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 814753 |
|---|
| End bp | 815634 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638009170 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_615862 |
|---|
| Protein GI | 103486301 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.960007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0103596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTCC CCCACGCGGC CACCATCGCC GGCGTCCTGA TGCTAGCTCT TGGAATCCCC
GGTGTTTCGG CGATGCAGAC GAACGAACCG GCGAGCAGCG CCAGCCCCTA CAGCTATGCC
GACATCGCCG ACCTGGCCAC CGCGGCGCCG ATCGTGCTGC ATGCGCGCAT CCACCGCGCC
GCAGCGCTCA AGCCCGATCG TGCGCCCGGC GTCGCGCCCG CGCACACGCG ATTCTATATC
GAGGCCGATG TCGTGAGCCT GATTCGCGGG AGCGGTCCGC TCGCGGCGCG AATCTCCTAT
CTCGTCGATC TGCCGAACGA CGCGCGCGGC AAACCCGCGA AGCTCAAGCG GAAGCAGCCG
GTCCTGCTCT TTGCCCGCCC CGTCGCCGGC ACCGCCGCCG GAACGAGCGA CACGGGCAGC
ATCCAGCTGA TCGCGCCCGA TGCGCAGCTG CCGTGGGACG CGGCGACCGA GGCGCGGCTG
CGCGCGATCC TGACCGAACT CGTCAAACCC GGCGCGCCGC CCGCGATCAC CGGTATCGCC
AACGGCTTCC ACGTCCCCGG CACGCTGCCG GGCGAGGGCG AGACGCAGCT ATTCCTGAAC
ACCGCCACGG GAGAACCCGT ATCGCTGACC ATCCTCACCT CCGCCGACGG TTCGCGGCGC
TGGGCGGCGG CGTTCGGCGA AATCGTCGAT GGGTCGGCGG CGGTGCCGGC GCGCGAAACG
CTCGCCTGGT ATCGCCTGGC CTGCGGCCTG CCGCGTCAGT TGCCGCTGGA CCGGCTGGCG
GGAACCGCGC CCGCGGACCG GCGCAAGGCG GCGGCGGATT ATGCCGTCGT CCTCGGCGCG
CTCGGCGAAT GCGCGCGAAC GCGCAAGCCG CCCGAGGGAT AA
|
|---|
| Protein sequence | MRLPHAATIA GVLMLALGIP GVSAMQTNEP ASSASPYSYA DIADLATAAP IVLHARIHRA
AALKPDRAPG VAPAHTRFYI EADVVSLIRG SGPLAARISY LVDLPNDARG KPAKLKRKQP
VLLFARPVAG TAAGTSDTGS IQLIAPDAQL PWDAATEARL RAILTELVKP GAPPAITGIA
NGFHVPGTLP GEGETQLFLN TATGEPVSLT ILTSADGSRR WAAAFGEIVD GSAAVPARET
LAWYRLACGL PRQLPLDRLA GTAPADRRKA AADYAVVLGA LGECARTRKP PEG
|
|---|
| |