| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0808 |
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| Symbol | |
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| ID | 4080358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 813821 |
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| End bp | 814474 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638009169 |
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| Product | TonB-like protein |
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| Protein accession | YP_615861 |
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| Protein GI | 103486300 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.656217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00924999 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTATG GTGATAGTGT CGACCCTAAA AACAGGGTAG TGGCGATTGT CTTGGTTGGT
CTGTTTACGG CAGTTCTGGG TTACGGCCTG GTCAACGGCC TGAACATCAG CATCGTCAAG
AAAATCGCTG AAAAGCTGGA CGTGGTGGAC GTCGAAGAGC CGCCGCCGCC GGAGGAGCCG
CCGCCGCCGC CGCCGCCGGA CAATGTGCTG CCGCCGCCGC CGCCGGTCGT GACGCCGCCG
TCGCCGATTC CGCCGCCGGT GACGACGAAC ACGATTCAGT CGGTTCCGAA GGCGCCGCCG
ACCCCGCCGC CGCCCGTCTT CACGCCGCCC GCGCCACCCG CGCCGCCGCC GCCCGACCTC
AGCCAGGCCG GTTCGCCGCG TGGCAACCCG GCGCGCTGGG CGACGAACGA CGATTATCCG
GCGCGCGCCA TGCGTGAGGA ACGCGAGGGC ACGACCGGGT TCCGCGTCAC CTATGGGACG
GACGGCCGCG TCACCTCTTG CGACATCACG TCGTCGAGCG GGCACGCCGA CCTCGATGCC
GAAACCTGCA AGCTGATCAC GCGCCGCGCC CGGTTCAACC CGGGCAAGGA CCGCGCGGGC
AACCCGACAG GCGGCACGTA CAGCAACCGT ATCCGTTGGC AGATCCCCCG CTGA
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| Protein sequence | MAYGDSVDPK NRVVAIVLVG LFTAVLGYGL VNGLNISIVK KIAEKLDVVD VEEPPPPEEP
PPPPPPDNVL PPPPPVVTPP SPIPPPVTTN TIQSVPKAPP TPPPPVFTPP APPAPPPPDL
SQAGSPRGNP ARWATNDDYP ARAMREEREG TTGFRVTYGT DGRVTSCDIT SSSGHADLDA
ETCKLITRRA RFNPGKDRAG NPTGGTYSNR IRWQIPR
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