| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0806 |
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| Symbol | |
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| ID | 4080356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 812315 |
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| End bp | 812836 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638009167 |
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| Product | biopolymer transport ExbD protein |
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| Protein accession | YP_615859 |
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| Protein GI | 103486298 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00274891 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATGA GTGTAGGCGA TAAGGGCGGC GAAGACGCCC CGATGTCCGA AATCAACACG
ACCCCGCTCG TGGACATCAT GCTCGTGCTT CTCATCATCT TCCTCATCAC GGTTCCCGTG
GTGTTGGAGA CGGTGGAACT CGAACTGCCC GACGTGGTCT TTGAACCGAC GACGACGAAG
CCTGAAAATG TGCTGCTGTC GATCCGGTCG GCCGACACCG ACGGCGATGG CCTGCCCAAT
CCCGAAAGCA CGGCATGCGA AGTTTACTGG GGCCAGACCC CCGTCGATTC GCGGCAGTTG
CTCGAACGCG GACAGGCGAA GCTGGAAAAG CTGCTCGAGG ACATCGGCGG GCCGCAGAAC
ATCACCGAAG AAAACTTCCC CGAAGTGCAT ATCCGCGGCG ACGTCAACAC GCCGTACCAG
TGCATCGGCG GCGTGATCTA CACGATGCAA TATGCCGGCT TCCAGAAGAT CGGGTTCATT
TCGGAACCGG CTCCTGGCTC GGGCACGGTG GGCCGCCTCT AA
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| Protein sequence | MAMSVGDKGG EDAPMSEINT TPLVDIMLVL LIIFLITVPV VLETVELELP DVVFEPTTTK
PENVLLSIRS ADTDGDGLPN PESTACEVYW GQTPVDSRQL LERGQAKLEK LLEDIGGPQN
ITEENFPEVH IRGDVNTPYQ CIGGVIYTMQ YAGFQKIGFI SEPAPGSGTV GRL
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