Gene Sala_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0798 
Symbol 
ID4080347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp803907 
End bp806303 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content63% 
IMG OID638009158 
ProductATP-dependent protease La 
Protein accessionYP_615851 
Protein GI103486290 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.595986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.028237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAT CCTATCCCCT TCTGCCGCTG CGTGACATCG TCGTTTTCCC GCACATGATC 
GTGCCGCTGT TCGTCGGTCG CGACCGTTCG GTGGCCGCGC TCGAAGCCGC GATGGAGGCG
GGCAAGGAGA TATTCCTCGT CGCCCAGCTC GATCCGGGCG AGGACGATCC GCAGCGCGAC
GACCTTTACG ACGTCGGCGT GATCGCGACG GTGCTCCAGT TGCTCAAGCT GCCCGACGGC
ACCGTTCGCG TGCTCGTCGA GGGCAAGGAA CGCGCGAAGC TCCTGGCGCT CACCGACGAG
GACAGGGCGG TGATGGCGAG CGTCAAGCCG ATCGCCGACA CCGTCGACGA CAGCGTCGAT
ACTGCGGCGC TGATGCGCTC GGTCGTCGAC CAGTTCGAAA ATTATGCCAA GCTCAACAAG
AAGATGCCCG CCGAAACCGC GGTGCAGCTG TCCCAGATCG ACGACGCCTC GCGCCTCGCC
GATTCGGTTG CCGGCAATCT CAACATCAAG GTTGCCGACA AACAGGCTTT GCTCGTCGAG
GATGCGCCGT CGAAGCGGCT CGAAATGGTG TTCGCCTTCA TGGAAGGCGA GCTCGGCGTG
CTGCAGGTCG AAAAGAAGAT CCGCGGCCGC GTGAAGCGCC AGATGGAAAA GAGCCAGCGC
GAATACTACC TCAACGAACA GTTGAAGGCG ATCCAGCGCG AACTCGGCAA CGACAATGGC
GAAGGCGGCG ACGACCTTGC TGAACTGCAA CTCAAGATCG ACAGCCTCAA AATGTCGAAG
GAGGCCAGGG CCAAGGCGAA TGCCGAGCTG AAAAAGCTGC GCGCGATGGC GCCCATGTCG
GCCGAGGCGA CGGTGGTGCG CAACTATCTC GACACGCTGA TCGGCCTGCC GTGGGGCAAG
AAATCGAAGC TCAAGAAGGA TATCGCCAAG GCGCAGGCGA TCCTCGACGA CGACCATTAT
GCGCTGGAGA AGGTCAAGGA CCGGATCGTC GAATATCTCG CGGTGCAGGC GCGCACCAAC
AAGCTGAAAG GCCCGATCCT CTGCCTCGTC GGCCCGCCGG GCGTCGGCAA GACTTCGCTC
GGCCGTTCGA TCGCGAAGGC GACGGGCCGC GAGTTCGTGC GCCAGTCGTT GGGCGGCGTG
CGCGACGAAG CCGAGATCCG CGGCCACCGC CGCACCTACA TCGGTTCGCT GCCGGGCAAG
ATCGTGACCA ATCTCAAAAA GGCGGGCACG ATGAACCCGC TGTTCCTGCT CGACGAGATC
GACAAGCTGG GGCAGGATTT CCGCGGCGAT CCGGCGTCGG CGCTGCTCGA AGTGCTCGAC
CCCGAACAGA ATGCGAAGTT CCAGGATCAT TATCTGGAAA TCGACGTCGA CCTTAGCGAC
ATCATGTTCG TGACGACGGC GAACTCGCTC AACCTGCCGC AGCCGCTGCT CGACCGCATG
GAGATCATCC GGCTCGAAGG CTATACCGAG GATGAGAAGG TCGAGATCGC GAAGCGCCAC
CTGATCGCCA AGCAGGTCGA GGCGCACGGG CTCAAGGATG GCGAGTTCGA ACTGACCGAG
GACGGTCTGC GCGATCTCAT CCGCTATTAC ACGCGCGAGG CGGGCGTCCG CACGCTCGAG
CGCGAGATAG CGCGTCTTGC GCGCAAGGCG CTGCGCAAGA TACTCGAGGG CAAGGCGGAA
AGCGTGACGA TCACGCCCGA AAACCTGTCC GACTTTTCGG GCGTGCGGAA GTATAGGCAC
GGCATCAGCG ATCTCGAGGA TCAGGTCGGC GCCGTGACCG GCCTTGCCTG GACCGAGGTC
GGCGGCGAAT TGCTGACGAT CGAGGCGGTC ACCGCATCGG GCAAGGGGCA GGTCAAGACG
ACCGGCAAGC TCGGCGAAGT GATGACCGAG TCGGTGCAGG CCGCATTGTC CTTCGTCAAA
GCACGCGCGC CCGCCTATGG CATCAAGCCC AGCCTGTTCG CGCGCAAGGA CATCCACATC
CACCTGCCCG AAGGCGCGGT ACCCAAGGAC GGGCCTTCGG CGGGCGTCGG CATGGTCACC
GCGATGATCT CGACGCTCAC CGGCATCGCC GTGCGCAAGG ATGTCGCGAT GACCGGCGAG
GTCACACTGC GCGGCCGCGT GCTCGCGATC GGCGGACTCA AGGAAAAGCT GCTTGCCGCG
CTTCGCGGGG GCATCAAGAC GGTGCTGATC CCCGAGGAGA ATGAAAAGGA TCTCGTGGAA
ATCCCGGCGA ACATAACGAG CGGGCTCAAA ATCATTCCGG TCAGCCACGT CGACCAGGTG
CTTGCCGAAG CGCTCGTTTC GCCGGTCGAA CCGATCGAAT GGACCGAGGC GGACGAGCTT
GCCGCCTCGC CGCCGATCGG CGTCGGCAGC GATCCCGAAA GCGCGATTCG CCACTGA
 
Protein sequence
MTQSYPLLPL RDIVVFPHMI VPLFVGRDRS VAALEAAMEA GKEIFLVAQL DPGEDDPQRD 
DLYDVGVIAT VLQLLKLPDG TVRVLVEGKE RAKLLALTDE DRAVMASVKP IADTVDDSVD
TAALMRSVVD QFENYAKLNK KMPAETAVQL SQIDDASRLA DSVAGNLNIK VADKQALLVE
DAPSKRLEMV FAFMEGELGV LQVEKKIRGR VKRQMEKSQR EYYLNEQLKA IQRELGNDNG
EGGDDLAELQ LKIDSLKMSK EARAKANAEL KKLRAMAPMS AEATVVRNYL DTLIGLPWGK
KSKLKKDIAK AQAILDDDHY ALEKVKDRIV EYLAVQARTN KLKGPILCLV GPPGVGKTSL
GRSIAKATGR EFVRQSLGGV RDEAEIRGHR RTYIGSLPGK IVTNLKKAGT MNPLFLLDEI
DKLGQDFRGD PASALLEVLD PEQNAKFQDH YLEIDVDLSD IMFVTTANSL NLPQPLLDRM
EIIRLEGYTE DEKVEIAKRH LIAKQVEAHG LKDGEFELTE DGLRDLIRYY TREAGVRTLE
REIARLARKA LRKILEGKAE SVTITPENLS DFSGVRKYRH GISDLEDQVG AVTGLAWTEV
GGELLTIEAV TASGKGQVKT TGKLGEVMTE SVQAALSFVK ARAPAYGIKP SLFARKDIHI
HLPEGAVPKD GPSAGVGMVT AMISTLTGIA VRKDVAMTGE VTLRGRVLAI GGLKEKLLAA
LRGGIKTVLI PEENEKDLVE IPANITSGLK IIPVSHVDQV LAEALVSPVE PIEWTEADEL
AASPPIGVGS DPESAIRH