Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0796 |
Symbol | |
ID | 4080345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 801674 |
End bp | 803371 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009156 |
Product | DNA polymerase III subunits gamma and tau |
Protein accession | YP_615849 |
Protein GI | 103486288 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0481374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATT CCGCCCACGA CGAAACCCCG ATGCTGGGCA TGGACCTGCC CGAGGCACCT GCGCCCGCGG CATCGTCCGG CCCTTACCGT GTTCTGGCAC GCAAATATCG CCCGCAAACC TTTGCGGAGC TGATCGGGCA GGATGCGATG GTGAAGACGC TGGGCAATGC GATCGCGCGC GACCGGCTGG CGCACGCCTT CCTGATGACC GGGGTGCGCG GGGTCGGCAA GACATCGACC GCGCGGCTGA TCGCCAAGGC TTTGAACTGC ATCGGCCCCG ACGGGCAGGG CGGGCCGACG ATCGACCCCT GCGGCGTGTG CGAACCGTGC CGCGCGATCA CCGAGGGTCG CCACATCGAC GTCATCGAGA TGGACGCCGC GTCGAACACC GGCGTCGACG ATGTGCGCGA GATTATCGAG GCGGTGCGCT ATGCTGCGGT GTCGGCGCGC TACAAGATCT ATATCATCGA CGAAGTGCAT ATGTTGTCGC GTAATGCCTT CAATGCGCTC CTGAAAACGC TCGAAGAGCC GCCGCCGCAC GTCAAGTTCC TGTTCGCGAC CACCGAGGTC AACAAGGTGC CGGTGACGGT GCTGTCGCGC TGCCAGCGGT TCGACCTGCG CCGCATCACC CCCGACATGC TGTTCGCGCA TTTCAGCGCG ATTTTGCAGA AAGAGGGCGT CGAGGCCGAG GCGCCCGCGA TCTGGCTGAT CGCCAATGCC GCCGAAGGAT CGGTGCGCGA CGGCCTGTCG ATCCTCGACC AGGCGATCGC CCACGCCGAT CTGGACGGCG GTGGCAAGGT CAGCGCCGAA CAGGTGCGCG CCATGCTCGG CCTGTCCGAT CGTTCGTCGA TCGCCGGGCT GATGGCGGCG ATTCTCGAGG GGAACAGCGG CGGCGCGATC GACCTTGCGC GCGCGCAATA TGCGCTGGGG ATCGAACCCG TCGCGATGGT GCGCGGCCTG ATGGAGCTGA CCCATGCGAT CACGCTCGCG AAGGTATCGC GCCACGACGA TCCCGCGCTC GCCGTGGCCG ACCGCGAACG CATCACCGAC TGGGCGCAAA AGCTGGGCTT TGCTCCGTTG AACCGGCTGT GGCAATTGCT GCTCAAGGGC CATGACGAGG TGCTGCGCGC GAACAATCCG CTCGAACATC TCGAAATGCT GCTGCTGCGC GTCATCTATG CCGCGTCGTT GCCCGATCCG GGTGAGCTTG CGAAATTGCT CGAATCGGGC GGCATACCGG CGATGCCCGT CGCAGCCGCC GCGGCGGCGA CAGGGTCGGA ACGCGCCGCG GCGGACCCTG CGCCCGCAGC CGGGCCCACC ACAGGCGCGC TCACCATCGC ACAGATTCAC CGGCTCCTCG AAAGCACGGG ACATCATCAG CTTGCGCGGC AGGTTTACGA CGATCTCCGG ATTCTGGAGC TGGAGCCGGG TCGCCTTGTC TATGCACCCG TCTCCGCGCT CGACGGCGAT TTTGCGCGAC GGCTCGGCGA AGCGCTGTTC GGTCAGACGG GCAGCCGCTG GCAAGTGCGC GAAGGCACGG GCGAGGGGCG CCCCAGCCTG GCGCAGATGA AGGCGGCGCA GCGCGCCGAT AATGAGGCAC GCATTCGCGA ACTGCCCGTC GTGAAGGCCG CGCTGGCGGC CTTTCCCGAC GCGCGGCTTG TCGAAGGCGA CAATAATCAG CATAGGTCGA ACCCATGA
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Protein sequence | MSDSAHDETP MLGMDLPEAP APAASSGPYR VLARKYRPQT FAELIGQDAM VKTLGNAIAR DRLAHAFLMT GVRGVGKTST ARLIAKALNC IGPDGQGGPT IDPCGVCEPC RAITEGRHID VIEMDAASNT GVDDVREIIE AVRYAAVSAR YKIYIIDEVH MLSRNAFNAL LKTLEEPPPH VKFLFATTEV NKVPVTVLSR CQRFDLRRIT PDMLFAHFSA ILQKEGVEAE APAIWLIANA AEGSVRDGLS ILDQAIAHAD LDGGGKVSAE QVRAMLGLSD RSSIAGLMAA ILEGNSGGAI DLARAQYALG IEPVAMVRGL MELTHAITLA KVSRHDDPAL AVADRERITD WAQKLGFAPL NRLWQLLLKG HDEVLRANNP LEHLEMLLLR VIYAASLPDP GELAKLLESG GIPAMPVAAA AAATGSERAA ADPAPAAGPT TGALTIAQIH RLLESTGHHQ LARQVYDDLR ILELEPGRLV YAPVSALDGD FARRLGEALF GQTGSRWQVR EGTGEGRPSL AQMKAAQRAD NEARIRELPV VKAALAAFPD ARLVEGDNNQ HRSNP
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