Gene Sala_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0793 
Symbol 
ID4080437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp799193 
End bp799849 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID638009153 
Producthydrolase 
Protein accessionYP_615846 
Protein GI103486285 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.100096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0734113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACG TCATTTTCCC CGGCCCCGAG GGCCGCATCG AAGGCCGTTT CTCGCCCCCG 
CCGCGTCCGC GCGCGCCGGT TGCGCTGATC CTCCACCCGC ACCCGCAGGG CGGCGGCACG
ATGAACGACC GCATCACGCA GGCGATGTAC AAGAGCTTCG TCGCGCGCGG TTTCGCGGTG
CTACGCTTCA ACTTTCGCGG CGTCGGCCGC AGTCAGGGCA CCTTCGACAA TGGTATCGGC
GAACTGTCCG ATGCCGCATC GGCGCTCGAC TGGGTGCAGT CGATCCATCC CGAGGCGCAA
ACCACCTGGG TGGCGGGGTT CAGCTTCGGC GCCTGGATCG GGATGCAATT GCTGATGCGC
CGCCCCGAAA TCCGCGGCTT CCTCTCGGTC GCGCCGCCGG CGAATATGTA CGACTTCAGC
TTCCTCGCCC CCTGCCCGTC ATCGGGGATC ATCGTCGCGG GCGGGCAGGA CGAGATCGTG
CCGCCGTCCG CGGTGCAGAA GCTGGTCGAC AAGCTGCGCA CGCAAAAGGG CATCACCATC
CATCACGACG AAATCCCGCG CGCCAACCAT TTCTTCGAGC ATGAGCTCGA TCAGCTGATG
AAGTCGCTCG ACAATTATCT GGACATGCGG CTCGCGCCCG ATTCGCCGAT CCGGTGA
 
Protein sequence
MPDVIFPGPE GRIEGRFSPP PRPRAPVALI LHPHPQGGGT MNDRITQAMY KSFVARGFAV 
LRFNFRGVGR SQGTFDNGIG ELSDAASALD WVQSIHPEAQ TTWVAGFSFG AWIGMQLLMR
RPEIRGFLSV APPANMYDFS FLAPCPSSGI IVAGGQDEIV PPSAVQKLVD KLRTQKGITI
HHDEIPRANH FFEHELDQLM KSLDNYLDMR LAPDSPIR