Gene Sala_0787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0787 
Symbol 
ID4080431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp795195 
End bp795602 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content67% 
IMG OID638009147 
Productchorismate mutase 
Protein accessionYP_615840 
Protein GI103486279 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.1269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.218255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGAAGGC GCGCGGTTAG ACGGGACGCG TCGCAAAGTC AAGCGCTGCG CCCGCGCTCG 
ACAGTGGCGA AAAAGCCGCT AAAGGCTGCG CGCATGACGA CCGCCAAACC TCCCGATCAA
TGCGAATCCA TGGCCGATGT CCGCGCCGGG GTCGATGCGG TCGATCGCGA CCTCGTCGCG
CTGCTGGTTC GCCGCTTCGC CTATATGGAC GCCGCGGCGC GGATCAAGAC CGACCGCGGC
ACCGTCCGCG ACGAAGCGCG CAAGGCGGAA GTGCTCGACA ATGTCGCGCG CGCGGCCGAA
GCCGCGGGAC TGGAACCCGC GCGGCTGCGC GCGGTGTGGA ACGAGCTGGT CGAACAATCA
ATCGCCTATG AGGCGGTTCA GTGGGATCGC CTGCGCGCCG ATAACTGA
 
Protein sequence
MRRRAVRRDA SQSQALRPRS TVAKKPLKAA RMTTAKPPDQ CESMADVRAG VDAVDRDLVA 
LLVRRFAYMD AAARIKTDRG TVRDEARKAE VLDNVARAAE AAGLEPARLR AVWNELVEQS
IAYEAVQWDR LRADN