Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0787 |
Symbol | |
ID | 4080431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 795195 |
End bp | 795602 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638009147 |
Product | chorismate mutase |
Protein accession | YP_615840 |
Protein GI | 103486279 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1605] Chorismate mutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.1269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.218255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGAAGGC GCGCGGTTAG ACGGGACGCG TCGCAAAGTC AAGCGCTGCG CCCGCGCTCG ACAGTGGCGA AAAAGCCGCT AAAGGCTGCG CGCATGACGA CCGCCAAACC TCCCGATCAA TGCGAATCCA TGGCCGATGT CCGCGCCGGG GTCGATGCGG TCGATCGCGA CCTCGTCGCG CTGCTGGTTC GCCGCTTCGC CTATATGGAC GCCGCGGCGC GGATCAAGAC CGACCGCGGC ACCGTCCGCG ACGAAGCGCG CAAGGCGGAA GTGCTCGACA ATGTCGCGCG CGCGGCCGAA GCCGCGGGAC TGGAACCCGC GCGGCTGCGC GCGGTGTGGA ACGAGCTGGT CGAACAATCA ATCGCCTATG AGGCGGTTCA GTGGGATCGC CTGCGCGCCG ATAACTGA
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Protein sequence | MRRRAVRRDA SQSQALRPRS TVAKKPLKAA RMTTAKPPDQ CESMADVRAG VDAVDRDLVA LLVRRFAYMD AAARIKTDRG TVRDEARKAE VLDNVARAAE AAGLEPARLR AVWNELVEQS IAYEAVQWDR LRADN
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