Gene Sala_0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0783 
Symbol 
ID4080426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp790306 
End bp791403 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content69% 
IMG OID638009142 
Producthypothetical protein 
Protein accessionYP_615836 
Protein GI103486275 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.930721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.646408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA AGATCAAGGC GTCCCTCGCC CCGTCCGCCG CCGCGCGCGC CAAGGCGTCG 
CCCGCGCCCG CTGTCAGCGC TGGCCGCGTC GCGATGGCGG CGGTGATCGT GATCGCCATC
GCAGGGGTGG CGTGGCTCGC GGTCAGCCTG ACGCGCTTTT TCATGCTGGT GTTCGCCGCG
GTCGTGCTCG GTGCGGTATT CGATGCGATC GCGAGCTGGC TCGTGCGCCG CGCGCGCGTC
GGGCGCGGCA TCGCCCTCGC GCTGTCGGTC GCGGGCATCG TCGCCGTCTT TGCCGGCGCC
TTCATCCTCT TCGGATCGCA GCTCGCGCGC GAGATCGACA CAATCCGCGA GCAGGTGCCG
CAAGCGCTGC GCGGGGTCGA GGCCTTCCTC GACCGCTATG GCCTCGGCGC GCGCGTGCGC
GAACTCGCCG AAGTGGGGAG CGAGGATATT TCGCAGCTCG TCTCGCAAGC CGGGGGCTAT
GCGCTCGCCG CGGGCAGCGG CATCGCCGAT TTCGTGCTCG TCCTCGTCGC GGGGATTTTC
CTCGCCAGCG ATCCCGCGAC CTATCGCCGC GGCCTGCTGT TGCTGGTGCC CGCGCGGGCC
GAAGCGACCG CCGCGCTGGC GCTCGATGAT GCCGCGCGCG GGTTGAAGGG CTGGATGATC
GGACAGGCGG TATCCTCGCT CGTCGTCGCG GCTTTGACAT GGGCCGGGCT TGCGCTGCTC
GGTGTGCCCG CGGCGGGTGG GCTCGGCCTG ATCGCCGGCC TGCTCGACGT CATCCCGATG
ATCGGGCCGA TCATCGCTGG CATTCCCGCC GTGCTGCTCG CCTTCACCGT GTCGCCGATG
ACCGCGCTGT GGACGCTGAT CCTGTTCCTC GTCATCCAGC AGCTCCAGGG CAATTTCCTG
CAACCGATGA TCCAGAAACA GGCGGTCGAC GTGCCGCCCG CCGTGTTGTT GTTTGCGGTC
GTCGCGGCGG GCCTGCTGTT CGGCTTCCTC GGCGTGCTGC TTGCCGCGCC GCTGACGGTG
GTGGTCTTTG TGCTGGTGCA GCGGGTCTAT GTGAAGACCT TGCTGGGCAA GGACATCAAG
ATCGCGGGAG CGGATTGA
 
Protein sequence
MTDKIKASLA PSAAARAKAS PAPAVSAGRV AMAAVIVIAI AGVAWLAVSL TRFFMLVFAA 
VVLGAVFDAI ASWLVRRARV GRGIALALSV AGIVAVFAGA FILFGSQLAR EIDTIREQVP
QALRGVEAFL DRYGLGARVR ELAEVGSEDI SQLVSQAGGY ALAAGSGIAD FVLVLVAGIF
LASDPATYRR GLLLLVPARA EATAALALDD AARGLKGWMI GQAVSSLVVA ALTWAGLALL
GVPAAGGLGL IAGLLDVIPM IGPIIAGIPA VLLAFTVSPM TALWTLILFL VIQQLQGNFL
QPMIQKQAVD VPPAVLLFAV VAAGLLFGFL GVLLAAPLTV VVFVLVQRVY VKTLLGKDIK
IAGAD