| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0775 |
|---|
| Symbol | |
|---|
| ID | 4080918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 781815 |
|---|
| End bp | 782987 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638009134 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_615828 |
|---|
| Protein GI | 103486267 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCCG ACCCACCCGA AAGATTGCGG CCGGTTCATA TCCTGCACCT TCATTCGAGC
TTCGCGCTCG GCGGCAAGGA GGCGCGCGCG GTCCGCCTGA TGAACCTGAT GCGCGCGCGT
GCGGCGCACA CGATATTGTC CGCTGTTCCG GGCGCGCTCG GCGCGCGTGA CGCCATCGAT
TCCGGCATTG ACGTGGACTT TCCCGCCGAC GCGCCGCCGC TTCACGGAAA GCCGGGGCTG
ATCCGATACG GCAGGCTTGC GCATTACATG GGCCGCTTCG ACCTTGTGCT CACCTATAAT
TGGGGGGCGA TGGACGGAGT AATGGCCCAT CGTTTGTGGG CGCCGTTCAT GCGCCTGCCG
CCGCTGATCC ATCACGAGGA CGGCTTCAAC GAGGATGAAA GCATCCGGCG CGATTGGAAG
CGGAACCTCT TTCGCCGCCT TGCGCTGCCG ACCGTAGAGG CGCTCGCGGT ACCCTCCGCC
CTGCTGGAGC GCATCGCGGC CGACGAATGG GGCGCCCGCG AACGGACGGT GGTGATCCGC
AACGGCATCG ATACGGCATC CTACGAGGCT CCGCCTTCTG TCGCGATTCC GGGGCTGGAA
CGCCGTCCGG GCGATGTGGT GATCGGGACC ATCGCCGGGC TGCGCAAGGT CAAGGATCTG
CCGCGGCTGG TCCGCGCGGT CGCCACCCTG CCACCGAATG TCCGGCTGGT CATCGTTGGC
GAAGGCCCCG AACGCGACGC GATCAGGGCG GCGGCGGCGA CGTGCGGCCT GGCGGAGCGG
CTCGTGATGC CCGGCTTCAT GCCTGAACCT GCGCGCTGGA TCGGCCATTT CGACCTGCTC
GCGCTGTCGT CGCTCAGCGA ACAGGCGCCG ATTGCAGTGA TCGAGGCGAT GGCGGCGGCG
CTGCCGGTGG TCAGCCCGGC GGTCGGCGAC GTCACCGCGA TGGTCTCCGA TATGAACCGC
CGTTTCATCA CCGATGACGA GGCGGGCTTT CGCGCCGCGC TTGCCCGCAT GGTGGGTGAC
AGCGCGTTGC GCAGGGCGGT CGGAGAGGAA AACCGGCGCG TCGCGACCGA ATACTTCGAC
GAATCAACGA TGGCCGCCGC CTATGAAAAG CTCTATGCTC GCGCACTCGA AGGCTATGGC
CTGTTCAGCG GGCGCCGGAT CGGCGTCGAT TGA
|
|---|
| Protein sequence | MNADPPERLR PVHILHLHSS FALGGKEARA VRLMNLMRAR AAHTILSAVP GALGARDAID
SGIDVDFPAD APPLHGKPGL IRYGRLAHYM GRFDLVLTYN WGAMDGVMAH RLWAPFMRLP
PLIHHEDGFN EDESIRRDWK RNLFRRLALP TVEALAVPSA LLERIAADEW GARERTVVIR
NGIDTASYEA PPSVAIPGLE RRPGDVVIGT IAGLRKVKDL PRLVRAVATL PPNVRLVIVG
EGPERDAIRA AAATCGLAER LVMPGFMPEP ARWIGHFDLL ALSSLSEQAP IAVIEAMAAA
LPVVSPAVGD VTAMVSDMNR RFITDDEAGF RAALARMVGD SALRRAVGEE NRRVATEYFD
ESTMAAAYEK LYARALEGYG LFSGRRIGVD
|
|---|
| |