Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0763 |
Symbol | |
ID | 4080906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 771263 |
End bp | 771718 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638009122 |
Product | cytidine deaminase, homotetrameric |
Protein accession | YP_615816 |
Protein GI | 103486255 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0295] Cytidine deaminase |
TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.499923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CGACGACCCG CAACGCGCTG ATCGCCGCCG CGCGCGATGC CGCGAGCCGC GCCTACGCGC CCTATTCGGG CTTTCATGTC GGCGCCGCGC TGCTGCTCAA AAATGGCGAT GTCGTGACCG GCGCCAATGT CGAAAATGCG AGCTATGGGC TGACGCTCTG CGCCGAAACC GCCGCGGTGG CGAAGATCGC GAACGAAGGC TGGATCGGTG AACTGGCCGA AGTCGCGATT GTCGGCGGCC GTCCCGACGG CGAGGCGCTG ACCGGCAGCG ATCCCGTCCA TCCCTGCGGG CGCTGCCGCC AGATATTGAA CGAGGCCGCC GAACGATCGC AGACCGACAT CCTGGTCCAT TGCGCCTCGG GCGACGACAG CGCGGTCGCA ACGTACAAGC TCAGCGAGCT GCTTCCCGCA GCGTTCGGGC CGAAGGATCT GGGGCTGATC GACTGA
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Protein sequence | MTDTTTRNAL IAAARDAASR AYAPYSGFHV GAALLLKNGD VVTGANVENA SYGLTLCAET AAVAKIANEG WIGELAEVAI VGGRPDGEAL TGSDPVHPCG RCRQILNEAA ERSQTDILVH CASGDDSAVA TYKLSELLPA AFGPKDLGLI D
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