Gene Sala_0763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0763 
Symbol 
ID4080906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp771263 
End bp771718 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content67% 
IMG OID638009122 
Productcytidine deaminase, homotetrameric 
Protein accessionYP_615816 
Protein GI103486255 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0295] Cytidine deaminase 
TIGRFAM ID[TIGR01354] cytidine deaminase, homotetrameric 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.499923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CGACGACCCG CAACGCGCTG ATCGCCGCCG CGCGCGATGC CGCGAGCCGC 
GCCTACGCGC CCTATTCGGG CTTTCATGTC GGCGCCGCGC TGCTGCTCAA AAATGGCGAT
GTCGTGACCG GCGCCAATGT CGAAAATGCG AGCTATGGGC TGACGCTCTG CGCCGAAACC
GCCGCGGTGG CGAAGATCGC GAACGAAGGC TGGATCGGTG AACTGGCCGA AGTCGCGATT
GTCGGCGGCC GTCCCGACGG CGAGGCGCTG ACCGGCAGCG ATCCCGTCCA TCCCTGCGGG
CGCTGCCGCC AGATATTGAA CGAGGCCGCC GAACGATCGC AGACCGACAT CCTGGTCCAT
TGCGCCTCGG GCGACGACAG CGCGGTCGCA ACGTACAAGC TCAGCGAGCT GCTTCCCGCA
GCGTTCGGGC CGAAGGATCT GGGGCTGATC GACTGA
 
Protein sequence
MTDTTTRNAL IAAARDAASR AYAPYSGFHV GAALLLKNGD VVTGANVENA SYGLTLCAET 
AAVAKIANEG WIGELAEVAI VGGRPDGEAL TGSDPVHPCG RCRQILNEAA ERSQTDILVH
CASGDDSAVA TYKLSELLPA AFGPKDLGLI D