Gene Sala_0759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0759 
Symbol 
ID4080902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp767085 
End bp768377 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content71% 
IMG OID638009118 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_615812 
Protein GI103486251 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.269455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGCTGT TCGTCGCGCA GGCGGTCAAT TTTGCGCTGC TCGTGCGCGG ACAAAAGCAA 
CAGATGCTCG CGCATGGCGG CGGCATGGCG GTGGCGCGGA TCATCGATGC GATCGACCGC
CACGAAAGCG GCCGGATCGC GGCGATGCCC GATCGCCGCC AGCGTTCTGG CCGGGCGCGC
ATCCCGAAAC TCTGGGTCGG CGCCAGCGCG CCGCCGGTGC CCGAGCGCGC GGTCGCGCTG
CCGGCGATGG CGGACTATGT GCACGACCTG CTCGCCGAGG CCGAGGTCGA TGCCGCAGCC
GTCACCGCGT GGGCCTTGCC GCAGCGGCCG CGGCTGGGGC GCACACGGCT GCCCGGTCGC
ACCGTGCTCG TCGTCGCCGA GGTGGATGGG CGCTTCTATG GCGTACGCAC CCGCGTCGCG
CCCGACGGTC GCCGCTTGCA GGGCTTCCTC GTCTGGCAGA CGCTGTCGCT CTACCTCTTG
CTGCTGATCC CGATCCTCGT GATCGCGTGG CGCGTCGCCG CGCCGCTCCG CGACCTGACG
CGCGCGGCGC GCGCCAGCCC TGCGCTGCAC GAGGCGGTGC CGCTCGCGGA GGCGGGACCG
TCGGACGTGC GCGACCTGAT TGCGGCTTTC AACGCCTATC GCGCGCGCAT CGCGGCGATG
CTGGCCGACA AGGACCGGAT GCTCGGCGCG GTCGGGCATG ACTTGCGCAC CCCGCTTGCC
AGCCTGCGCG TCCGCGTCGA GCAGGTCGAG GATGATCGGC TGCGCGACAA GATGATCGCC
AGCATCGACG AAATGACCGC GATGCTGACC GATATATTGG CGCTGGCGCG GTCGGGCGCG
GGGACCGAGG CGGTCGGGGC GCTCGCACTG GACGAACTCG TCGGCGAAAT CATTGCCGAC
TATCGCGAGC GCGGCAAGGA TGTCGCGGCG GGGGCGTTGG CCCCGGCGAC GGTGCACGCG
CGGCCGATGC TGCTGAAGCG CGCGGTGCGC AACCTCGTCG ACAATGCCGT CGCCTATGGC
GTGCGCGCGC GGCTGTCGGT GATGGTAGAG GGCGGCAAGG CGCGGATTAT CGTGTCGGAC
GACGGCCCCG GCCTGACCGA CGAGCAGATC CGTACGCTGG TCGAACCCTT CGCGCGTGGC
GAGTTGTCGC GCAACCGTGC GACTGGCGGT GCTGGCCTGG GCCTGTCGAT CGCCCGCGAA
ATTGCGGAGG GCGAGGGAGG AACGCTGACA CTTGCGAACC GCGCGGGCGG CGGGCTCGAT
GCGGTGATCG CGTTGCCGGT TCAGGGGCGG TGA
 
Protein sequence
MMLFVAQAVN FALLVRGQKQ QMLAHGGGMA VARIIDAIDR HESGRIAAMP DRRQRSGRAR 
IPKLWVGASA PPVPERAVAL PAMADYVHDL LAEAEVDAAA VTAWALPQRP RLGRTRLPGR
TVLVVAEVDG RFYGVRTRVA PDGRRLQGFL VWQTLSLYLL LLIPILVIAW RVAAPLRDLT
RAARASPALH EAVPLAEAGP SDVRDLIAAF NAYRARIAAM LADKDRMLGA VGHDLRTPLA
SLRVRVEQVE DDRLRDKMIA SIDEMTAMLT DILALARSGA GTEAVGALAL DELVGEIIAD
YRERGKDVAA GALAPATVHA RPMLLKRAVR NLVDNAVAYG VRARLSVMVE GGKARIIVSD
DGPGLTDEQI RTLVEPFARG ELSRNRATGG AGLGLSIARE IAEGEGGTLT LANRAGGGLD
AVIALPVQGR