Gene Sala_0756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0756 
Symbol 
ID4081166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp764045 
End bp765175 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content67% 
IMG OID638009114 
ProductDNA polymerase IV 
Protein accessionYP_615809 
Protein GI103486248 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACA GCGACGATCA TGGCCTCGAC GACGGCGCGG ACCCGCCCCC GGTCCGCAAG 
ATCATCCACG TCGACATGGA CGCCTTTTAC GCTTCGGTCG AACAGCGCGA CGATCCCGCG
CTCCGCGGCA AGCCGGTTGC GGTCGGCGGA TCGTCGCGGC GCGGCGTCGT TGCGGCCGCC
TCCTATGAGG CGCGGCGGTT CGGCGTACGC TCGGCAATGC CCAGCATTAC CGCGAAGCGC
CAGTGCCCCG GCCTCATCTT CGTGCCGCCG CGTTTCGAGG TTTACCGCGA GGTGTCGCAT
CAGATCCGCG CGATTTTCCG CGATTATGCC GACGAGGTCG AGCCGCTGTC GCTCGACGAG
GCCTATCTCG ACGTCAGCGC CGACAAGGCG GGACTCGGCA GCGCGACCGC GACCGCGCGG
CTGATCCGCC GCCGCATCCG CGAAGAAACC GGGCTCACCG CCTCGGCCGG GGTATCCTAT
AACAAGTTCA TCGCCAAGCT GGCGTCGGAC CAGAACAAGC CGGACGGCCT CACCGTCATC
CCGCCGGGCA AGGGCGCCGC CTTTGTCCAG ACGCTGTCGA TCCGTCGTTT CCACGGCATC
GGCCCTGTTA CCGCGGCAAA AATGGAGGGG CTCGGCGTCT TTTCGGGCGC CGACCTAGCC
GCGAAAGATC CGTTGTGGCT CGCCGAGCAT TTCGCCAACA GCGCCGAATG GCTCTATAAC
CTTGCCCGCG GGATCGACCA TCGCCGCGTC AAGTCGAACC GGCCGCTCAA ATCCTTGGGC
GGCGAGCGCA CCTTCTTCAA CGACCTGATC ACCGATACCG AAATCCGCGA GGCGCTGGCG
CATGTCTGCA CCGTGGTATG GGACCGCGCG GTGAAAAAGG GCGCACGCGG GCGCACGGTG
ACGCTGAAGT TGCGCTACGC CGATTTCCGC ACGATCACGC GCGCGAAGTC GGTGCCTTCG
CCGATCCGCG ATGGCGCCAG CCTGCTCGCG GTGGGCGAGG CAATCCTGGC TCCCCTGCTG
CCCAGCGAAC AGGGCATCCG CCTGCTCGGT GTCACGCTGA GCAAGTTCGA GGGCGAAGAG
GAGGAGGGGG ACGAAGCCCC CGCCCCCGCC GACCTGCTCA GCCTTATTTA G
 
Protein sequence
MDDSDDHGLD DGADPPPVRK IIHVDMDAFY ASVEQRDDPA LRGKPVAVGG SSRRGVVAAA 
SYEARRFGVR SAMPSITAKR QCPGLIFVPP RFEVYREVSH QIRAIFRDYA DEVEPLSLDE
AYLDVSADKA GLGSATATAR LIRRRIREET GLTASAGVSY NKFIAKLASD QNKPDGLTVI
PPGKGAAFVQ TLSIRRFHGI GPVTAAKMEG LGVFSGADLA AKDPLWLAEH FANSAEWLYN
LARGIDHRRV KSNRPLKSLG GERTFFNDLI TDTEIREALA HVCTVVWDRA VKKGARGRTV
TLKLRYADFR TITRAKSVPS PIRDGASLLA VGEAILAPLL PSEQGIRLLG VTLSKFEGEE
EEGDEAPAPA DLLSLI