Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0749 |
Symbol | |
ID | 4081159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 756212 |
End bp | 757048 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638009107 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_615802 |
Protein GI | 103486241 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGG CGAACGATCG CAATCGCCTC CCATGGCCCG CTTTGGTCGG CGTGTTGCTG GGCGCAGCCA TCATGGTTGC GCCGCTGGTT TGGACGCTGC TGCTGTCGCT CAAGAGCAAC AGCGATCTCA TGCGCGACAG TGCATCCGCC CTGTCCCTGC CCTACACGCT CGACAATTAC CGCGACATAA TGACCGGGTC TGATGTGCCG CGCTGGTTGC TCAACAGCCT GATCGTTTCG ACTGGCACAA CTGTCGGCGT ATTGATGCTT TGCTCGCTGG CCGGGTACGG CTTTGCGCGC CTCGACTTTC CCTTTCGCCG GACGCTGTTC ATATTTGTGT TGCTGGGGCT TGCCATCCCC GAACAGGCGG TGATCCTTCC GCGCCACCAG TTATTTGCGG CGCTCGGTTG GCACAACAGC TATCCCGGCC TGATTTTTCC AGGGCTGGCC GCGCCCTTCG GGGTGTTTTT CATGACCCAG TATTTCCGTG CGATTCCCAG GGATCTCGAT GAGGCGGCAA TGCTCGACGG GGCTTCGCGG ATCGCGATTT TCTGGAAGGT TCTGCTGCCT CTGTCGTTTC CGGCACAGGC GACGCTGGGC GTCTTCACCT TCCTCGGATC CTGGAACGAT TACTGGTGGC CGCTCATCTC CGCCACCACC AGCGACAAAT ACACGCTGAC CGTCGGGTTG GCATCGGCGC AGATGAACTA TGCGCAAACC AGCGGGCTGG GCTTTCTGAT GGCGCAAGCC GTTTTTGCAT CCATCCCGAT CCTGATCGTT TACATCATTT TTCAGAAACA GATTGTCGGC GCGATGGCCG GGGCGGCGAC CCGGTGA
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Protein sequence | MSAANDRNRL PWPALVGVLL GAAIMVAPLV WTLLLSLKSN SDLMRDSASA LSLPYTLDNY RDIMTGSDVP RWLLNSLIVS TGTTVGVLML CSLAGYGFAR LDFPFRRTLF IFVLLGLAIP EQAVILPRHQ LFAALGWHNS YPGLIFPGLA APFGVFFMTQ YFRAIPRDLD EAAMLDGASR IAIFWKVLLP LSFPAQATLG VFTFLGSWND YWWPLISATT SDKYTLTVGL ASAQMNYAQT SGLGFLMAQA VFASIPILIV YIIFQKQIVG AMAGAATR
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