Gene Sala_0749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0749 
Symbol 
ID4081159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp756212 
End bp757048 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content60% 
IMG OID638009107 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_615802 
Protein GI103486241 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CGAACGATCG CAATCGCCTC CCATGGCCCG CTTTGGTCGG CGTGTTGCTG 
GGCGCAGCCA TCATGGTTGC GCCGCTGGTT TGGACGCTGC TGCTGTCGCT CAAGAGCAAC
AGCGATCTCA TGCGCGACAG TGCATCCGCC CTGTCCCTGC CCTACACGCT CGACAATTAC
CGCGACATAA TGACCGGGTC TGATGTGCCG CGCTGGTTGC TCAACAGCCT GATCGTTTCG
ACTGGCACAA CTGTCGGCGT ATTGATGCTT TGCTCGCTGG CCGGGTACGG CTTTGCGCGC
CTCGACTTTC CCTTTCGCCG GACGCTGTTC ATATTTGTGT TGCTGGGGCT TGCCATCCCC
GAACAGGCGG TGATCCTTCC GCGCCACCAG TTATTTGCGG CGCTCGGTTG GCACAACAGC
TATCCCGGCC TGATTTTTCC AGGGCTGGCC GCGCCCTTCG GGGTGTTTTT CATGACCCAG
TATTTCCGTG CGATTCCCAG GGATCTCGAT GAGGCGGCAA TGCTCGACGG GGCTTCGCGG
ATCGCGATTT TCTGGAAGGT TCTGCTGCCT CTGTCGTTTC CGGCACAGGC GACGCTGGGC
GTCTTCACCT TCCTCGGATC CTGGAACGAT TACTGGTGGC CGCTCATCTC CGCCACCACC
AGCGACAAAT ACACGCTGAC CGTCGGGTTG GCATCGGCGC AGATGAACTA TGCGCAAACC
AGCGGGCTGG GCTTTCTGAT GGCGCAAGCC GTTTTTGCAT CCATCCCGAT CCTGATCGTT
TACATCATTT TTCAGAAACA GATTGTCGGC GCGATGGCCG GGGCGGCGAC CCGGTGA
 
Protein sequence
MSAANDRNRL PWPALVGVLL GAAIMVAPLV WTLLLSLKSN SDLMRDSASA LSLPYTLDNY 
RDIMTGSDVP RWLLNSLIVS TGTTVGVLML CSLAGYGFAR LDFPFRRTLF IFVLLGLAIP
EQAVILPRHQ LFAALGWHNS YPGLIFPGLA APFGVFFMTQ YFRAIPRDLD EAAMLDGASR
IAIFWKVLLP LSFPAQATLG VFTFLGSWND YWWPLISATT SDKYTLTVGL ASAQMNYAQT
SGLGFLMAQA VFASIPILIV YIIFQKQIVG AMAGAATR