| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0725 |
|---|
| Symbol | |
|---|
| ID | 4081345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 731929 |
|---|
| End bp | 732318 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638009084 |
|---|
| Product | type IV pilus assembly PilZ |
|---|
| Protein accession | YP_615779 |
|---|
| Protein GI | 103486218 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCGC AACGGCCAGC AACATTGGAC GAAGAGGTCG CGGCGCTATC GCGCAGTGCC
GATCGCGACA GCTTGTTCAT GCAGGCCGAG ATGGCGCTCG GCGGGCGGCC CGGACGCACC
ACGGTGCGCG TACGCAACCT GTCGCCGGGC GGGATGCTTG CCGAAGCCAT GGTGGCGGTC
GAGCAAGGCG CAGCGGTTGA GGTGGATCTG CGCAACATCG GCCCGGTTGC AGGCCGCGTG
ATCTGGGTCG GCGAGGGCAA GTTCGGAATC GCGTTCGACC GGCTGGTCGA TCCGCGGGCG
GTGCGTCGTC AACTGGTGTC GGGGTCCGAC CTGCCGCCCC ATCTGCGGCA ACGAGGGGCG
GTCGGCGACC CCTTCCATCG CCGGCGCTGA
|
|---|
| Protein sequence | MDSQRPATLD EEVAALSRSA DRDSLFMQAE MALGGRPGRT TVRVRNLSPG GMLAEAMVAV
EQGAAVEVDL RNIGPVAGRV IWVGEGKFGI AFDRLVDPRA VRRQLVSGSD LPPHLRQRGA
VGDPFHRRR
|
|---|
| |