Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0720 |
Symbol | |
ID | 4081340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 726177 |
End bp | 727244 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009079 |
Product | TrkA-N |
Protein accession | YP_615774 |
Protein GI | 103486213 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1226] Kef-type K+ transport systems, predicted NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA GGACCAACTC CCGGCTTCAT ATCCAGGGCA GCATCAACCT GCTCAAACGC GCGAGCAAAT GGCCGATCTG GGCCGACGTC GTCACGCGTC TCAGCATCGC CTTCGCCCTG ATCGGCGTTG TCGTGCTCGT TCACTGGATC GACCGCGACG GATTGATCGA CCATCATGAT GGCCACATCA GCTTCCTCGA CGTCGTCTAT TTCACGATGA TTTCGGTCAC GACGACGGGG TTCGGCGACA TCGCGCCGAT CTCCGACCGC TCGCGGCTGA TCGAAGCGGT GATCGTCACG CCGATCCGCA TCGCGGTGCT CTTCATCTTC GTCGGCACCG CCTATAATTT CGTCATCAAG CGCACATGGG AAAAATGGCG TATGGCCCGC ATCCAGTCCA GGCTCACCAA TCATATCGTC GTGCTCGGCT ATGGCGTCAG CGGCGCCGAG GCGGTGCATG AGCTGATCCA GCGTGGCACC GACCCGTCGT GCATCGTCGT CATCGACCAG TCGCCCGCGC GCATCGGTGC CGCCGAGGCG GCGGGATGCA ATGTACTCGC GGGCGATGCC TCGAACGACG AAACGCTCGT CGCGGTGCGC GTGGCCGAGG CGCAGTCGGT GCTCGTCTCC GCGGGACGCG ACGACACCTC GATCCTGATC GTTCTTACCG TGCGTCACCT TGCCCCCAAG GTGCCGATCA GCGTCGTCAT CCGCGCGCAG GACAATGAGC TGCTCGCACG CCAGGCGGGC GCGAACAATG TCATCAACCC GGTCAGCTTT ACCGGGCTGC TGCTCGCCGG ATCGGCGCAG GGGGCGCATG TCGCCGAATA TATGGCCGAC CTGGCCAGCA TCGGGGGGCG CGTCCAGCTG CGCGAACGGC CGGTCGCCGC CGAAGAGGTA GGCCGCAGCC TCGACCAGCT TGCGAGCGGC GGGCGCGGGC TGCGTGTCTA TCGCGCCGGC ACACCCCATG GCTTCTGGGA GCCCGAAGCG CAGCGGCTTG AACATGGCGA CCTGATCGTC GAAGTCGTCC GCTGCGAAGA CGATGAGGCG GCGGCTTCCG CCGGTTGA
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Protein sequence | MSKRTNSRLH IQGSINLLKR ASKWPIWADV VTRLSIAFAL IGVVVLVHWI DRDGLIDHHD GHISFLDVVY FTMISVTTTG FGDIAPISDR SRLIEAVIVT PIRIAVLFIF VGTAYNFVIK RTWEKWRMAR IQSRLTNHIV VLGYGVSGAE AVHELIQRGT DPSCIVVIDQ SPARIGAAEA AGCNVLAGDA SNDETLVAVR VAEAQSVLVS AGRDDTSILI VLTVRHLAPK VPISVVIRAQ DNELLARQAG ANNVINPVSF TGLLLAGSAQ GAHVAEYMAD LASIGGRVQL RERPVAAEEV GRSLDQLASG GRGLRVYRAG TPHGFWEPEA QRLEHGDLIV EVVRCEDDEA AASAG
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