Gene Sala_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0716 
Symbol 
ID4081805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp722321 
End bp722965 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content64% 
IMG OID638009075 
Producthypothetical protein 
Protein accessionYP_615770 
Protein GI103486209 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.68785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCTT GGTTCCAGCG GCTGCTGCCG CGGCAGGGCA ATTTTTTCGA ATTGTTCGAA 
AGCCACGCAG CCACGCTGGT GGCGGGCGCC AATGCACTGT CGCGCATGTT GCAGGGCGGT
GAGGGCATGG CCGATCATGT GCGCGAGATC ATCGAGCGCG AGCATGACGC CGACGCGATC
ACGCGCGAGG TGCTCCAGAC GGTCCGCCGC ACCTTCCTGA CGCCTTTCGA CCGCGGCGCG
ATCACCGACC TTATCGCTTC GATGGACGAT GCGATCGACG AGATGCAGAA GACTGCGGGC
GCGGTCGACC TGTATGATGT CACCGAGTTC GAGCCCGAGA TGCGCGACAT TGCGGGCATC
ATCGTCGATG CGGCGCGCCT GACCGCAGAA GCGCTGCCGT TGCTCCGCAA CATCGGCGCC
AACGGCCCGC GTCTTCACGA GCTGACCGAG CGGCTGGTGC GAATGGAGGG CCATGCCGAC
GAAATCCATG CCTCGGGCCT CAAGCGGCTG TTCCGCGAGC ATGGCGAGAC GAACCCGACG
CGCTTTCTGA TCGCGCGCGA ACTGTTTCGC CACCTCGAGC GCGTCACCGA CAGTTTCGAG
GATGTCGCGA ACGAAATCGA CGGCCTGGTC ATCGACCACG CCTAG
 
Protein sequence
MFAWFQRLLP RQGNFFELFE SHAATLVAGA NALSRMLQGG EGMADHVREI IEREHDADAI 
TREVLQTVRR TFLTPFDRGA ITDLIASMDD AIDEMQKTAG AVDLYDVTEF EPEMRDIAGI
IVDAARLTAE ALPLLRNIGA NGPRLHELTE RLVRMEGHAD EIHASGLKRL FREHGETNPT
RFLIARELFR HLERVTDSFE DVANEIDGLV IDHA