| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0714 |
|---|
| Symbol | |
|---|
| ID | 4081803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 719077 |
|---|
| End bp | 719916 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638009073 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_615768 |
|---|
| Protein GI | 103486207 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.703561 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACA AAAGACCCTG GCGAAACGCC GTTTCGTTGC TTGCCGGTGC GCTGTTGCTG
GCGGGCTGTT CCGAAGACCG GCCGACACAG GTGGAAAAGA TGGTGGCCGC CGCCGTCCCC
GGCGCGCCGC CCACCGCCGC CGCCGACGAA GCGGCCAAAA ATGCTTCGGC ATCGAAGGTC
AGCGAAAGCA GCGACTTGAT CGAGTTCACC TATAGCTATC CCGCCGACGC CGCGCGGATT
CCCGAACTCG CCGAGGCATT GGACAGCGAT CGCGCCGCGA AGCGCGCGGC GCTCATCGCA
GCGGCGGAGC GCGCCAAGGC CGCGGCCGAA AAGAACGACC ATCCCTATCG CCCGCACAGC
CATCGCCAGA CCTGGCAGCG CGTCACCAAC ACGCCGCGCT TTCTCAGCCT GTCGGCGGAG
ATCGATACCT ATACGGGTGG CGCACACGGG ATGGAGGTGT TCGACACGCT GCTGTGGGAC
CGGGGCCGCC GCAAGCGGAT GAAACCGCTC GACCTGTTCG AGAGCAGCGC CGCCTTCGAC
GCCGCAGTCC GTGAGGCCTT CTGCGCGGGG ATCAAGCGTG CGAAAGCCGC GAAGGGCATC
GCGGCGGCGG AGGCGCCCGA CAGCCCCTTT GCCAAATGCC CGCCGGCGTC GGCGCAGACG
GTGTGGATCG GCTCGTCCGA CGGGCGCTAT CTCGACCGCC TGACGATCGC GATCGCTCCT
TATGAAGTCG GCCCCTATGC CGAGGGCAGC TATCGGATCA ACGTGCCGAT CACCGGCGCG
GTCGCGAAGG TCGTGAAGGA CGAGTTTGCG CGCAATATCA TGCCGATAAA CCAACCCTAG
|
|---|
| Protein sequence | MTNKRPWRNA VSLLAGALLL AGCSEDRPTQ VEKMVAAAVP GAPPTAAADE AAKNASASKV
SESSDLIEFT YSYPADAARI PELAEALDSD RAAKRAALIA AAERAKAAAE KNDHPYRPHS
HRQTWQRVTN TPRFLSLSAE IDTYTGGAHG MEVFDTLLWD RGRRKRMKPL DLFESSAAFD
AAVREAFCAG IKRAKAAKGI AAAEAPDSPF AKCPPASAQT VWIGSSDGRY LDRLTIAIAP
YEVGPYAEGS YRINVPITGA VAKVVKDEFA RNIMPINQP
|
|---|
| |