Gene Sala_0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0708 
Symbol 
ID4081797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp712708 
End bp713823 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content64% 
IMG OID638009067 
ProductDNA polymerase III subunit beta 
Protein accessionYP_615762 
Protein GI103486201 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.147601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.843721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGA CGATCGAACG CGCAGTCTTG TTGAAAAGCC TCGGCCACGT TCAATCGGTG 
GTCGAACGGC GCAATACGAT CCCGATCCTG TCGAACGTCC TCATCGAAGC CGACGGCACG
GGCCAACTCA GGCTGATGGC GACCGACCTT GATCTGCAGG TGGTCGAAAC GATTGCCGCC
AAGGTCGAAA CGCCGGGTAC GACCACCGTA TCGGCGCACA CCCTGTTCGA GATCGCGCGC
AAGCTGCCCG AAGGATCGGA AGTCAGCCTC GCCGCCGCCG AGGGCAAGGT GCAGGTCAAG
GCCGGCCGCT CGAACTTCAA CCTGCCGACC TTGCCGCGCG ACGATTTCCC GGTGATCGCC
GAGGGCGACC TGCCGACCAA TTTCGAACTG CCCGTCGCCG AGCTCATCCA GATCATCGAC
AAGACGCGCT TCGCCATCTC GACCGAGGAA ACGCGCTATT ATCTGAACGG CATCTTCCTG
CACGTTGCCG AGGATGCGAC GGGGCCGGTG CTGAAGGCGG CGGCGACCGA CGGCCACCGC
CTCGCGCGCT ACACGGTGAC GCGCCCCGAC GGTGCGGCCG GGATGCCCGA CGTGATCGTT
CCGCGCAAAT GCGTTGGCGA AATCCGCAAG CTGCTCGACG AGGCGGAGGG TAATGTCGAA
ATCAGCCTGT CGGCGAGCAA GATCCGCTTC CAGCTCGGCA ACGCGGTCCT GACGTCGAAG
CTGATCGACG GCACCTTCCC CGACTACAGC CGCGTCATTC CGACCGCGAA TGACAAGCTG
CTGAAAGTCG ATCCGAAAAG CCTGTTCCAG GGCGTCGACC GCGTGTCGAC GATCGCCAGC
GAAAAGACGC GCGCGGTCAA GGTCGGGCTC GACAAGGACC GGATCACGCT CAGCGTCACC
AGCCCCGAAA ACGGCACCGC CGCCGAAGAA CTCGCCGCCG CCTACGACAG CGACGCGATG
GAGATCGGCT TCAACGCCCG CTACCTCAGC GACATTTTGG GACAGGTCGA TGGCGACAGC
GTCGAACTTC ACCTCGCCGA CGCCAACGCC CCTACGCTGA TCCGCGAGAG CGAAAAAAGC
CCGGCGCTTT ACGTGCTGAT GCCGATGCGG GTCTGA
 
Protein sequence
MKATIERAVL LKSLGHVQSV VERRNTIPIL SNVLIEADGT GQLRLMATDL DLQVVETIAA 
KVETPGTTTV SAHTLFEIAR KLPEGSEVSL AAAEGKVQVK AGRSNFNLPT LPRDDFPVIA
EGDLPTNFEL PVAELIQIID KTRFAISTEE TRYYLNGIFL HVAEDATGPV LKAAATDGHR
LARYTVTRPD GAAGMPDVIV PRKCVGEIRK LLDEAEGNVE ISLSASKIRF QLGNAVLTSK
LIDGTFPDYS RVIPTANDKL LKVDPKSLFQ GVDRVSTIAS EKTRAVKVGL DKDRITLSVT
SPENGTAAEE LAAAYDSDAM EIGFNARYLS DILGQVDGDS VELHLADANA PTLIRESEKS
PALYVLMPMR V