Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0708 |
Symbol | |
ID | 4081797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 712708 |
End bp | 713823 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638009067 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_615762 |
Protein GI | 103486201 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.147601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.843721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCGA CGATCGAACG CGCAGTCTTG TTGAAAAGCC TCGGCCACGT TCAATCGGTG GTCGAACGGC GCAATACGAT CCCGATCCTG TCGAACGTCC TCATCGAAGC CGACGGCACG GGCCAACTCA GGCTGATGGC GACCGACCTT GATCTGCAGG TGGTCGAAAC GATTGCCGCC AAGGTCGAAA CGCCGGGTAC GACCACCGTA TCGGCGCACA CCCTGTTCGA GATCGCGCGC AAGCTGCCCG AAGGATCGGA AGTCAGCCTC GCCGCCGCCG AGGGCAAGGT GCAGGTCAAG GCCGGCCGCT CGAACTTCAA CCTGCCGACC TTGCCGCGCG ACGATTTCCC GGTGATCGCC GAGGGCGACC TGCCGACCAA TTTCGAACTG CCCGTCGCCG AGCTCATCCA GATCATCGAC AAGACGCGCT TCGCCATCTC GACCGAGGAA ACGCGCTATT ATCTGAACGG CATCTTCCTG CACGTTGCCG AGGATGCGAC GGGGCCGGTG CTGAAGGCGG CGGCGACCGA CGGCCACCGC CTCGCGCGCT ACACGGTGAC GCGCCCCGAC GGTGCGGCCG GGATGCCCGA CGTGATCGTT CCGCGCAAAT GCGTTGGCGA AATCCGCAAG CTGCTCGACG AGGCGGAGGG TAATGTCGAA ATCAGCCTGT CGGCGAGCAA GATCCGCTTC CAGCTCGGCA ACGCGGTCCT GACGTCGAAG CTGATCGACG GCACCTTCCC CGACTACAGC CGCGTCATTC CGACCGCGAA TGACAAGCTG CTGAAAGTCG ATCCGAAAAG CCTGTTCCAG GGCGTCGACC GCGTGTCGAC GATCGCCAGC GAAAAGACGC GCGCGGTCAA GGTCGGGCTC GACAAGGACC GGATCACGCT CAGCGTCACC AGCCCCGAAA ACGGCACCGC CGCCGAAGAA CTCGCCGCCG CCTACGACAG CGACGCGATG GAGATCGGCT TCAACGCCCG CTACCTCAGC GACATTTTGG GACAGGTCGA TGGCGACAGC GTCGAACTTC ACCTCGCCGA CGCCAACGCC CCTACGCTGA TCCGCGAGAG CGAAAAAAGC CCGGCGCTTT ACGTGCTGAT GCCGATGCGG GTCTGA
|
Protein sequence | MKATIERAVL LKSLGHVQSV VERRNTIPIL SNVLIEADGT GQLRLMATDL DLQVVETIAA KVETPGTTTV SAHTLFEIAR KLPEGSEVSL AAAEGKVQVK AGRSNFNLPT LPRDDFPVIA EGDLPTNFEL PVAELIQIID KTRFAISTEE TRYYLNGIFL HVAEDATGPV LKAAATDGHR LARYTVTRPD GAAGMPDVIV PRKCVGEIRK LLDEAEGNVE ISLSASKIRF QLGNAVLTSK LIDGTFPDYS RVIPTANDKL LKVDPKSLFQ GVDRVSTIAS EKTRAVKVGL DKDRITLSVT SPENGTAAEE LAAAYDSDAM EIGFNARYLS DILGQVDGDS VELHLADANA PTLIRESEKS PALYVLMPMR V
|
| |