| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0678 |
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| Symbol | |
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| ID | 4082975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 685639 |
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| End bp | 686526 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009037 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_615732 |
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| Protein GI | 103486171 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.364827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCACA TATCATCCTC GCCAGCGGGC GTGGGCGGCA GCGCGCCGTT CGAGCTTCAT
TATTTTCCGC CCGATCCCGA TCTGGCGGAG ATGGTGTCGA GCTTTTACGT CGCGCGCATC
AATGTGCCGC GGTTCGACGA ATATGAACGC GCCGACCGCC CGCAATTCCG TTTCATGACC
GTCGCCGACG GCGAATATGT CTTTGCCGAC GGCCATCATT CGCCCGCGTG CCGGGCCAAT
ATCGTCGGGC CGACCAGCGG CCGCGTGCGC GCCATCGCCA ACGGTCCGAC CACGATGTTC
GGATTCGGCC TGTTGCCCGC GGGCTGGGCG GCGCTGATGG GCGACGACGC CGACAAGCTG
ACCGACGATG CGATGGATGC GGCCGACCTG TTCGGCCCCT GGATCGACGA GGTGGCCACC
GCGCTCGAAC AAGCGCAAAC CGCCGAGGAA AAGCTGGTGA TCGGCAATAA TTTCGCGCGC
GAGGTGCTGA CGCGCGGCGA GACCGCGCCC ATGTGGTTCA TCCGCACCGT CGACGAGTGG
CTGACTGCGA CACCTTCGCC GCAGGTGCCC GCGCTGGTCG AAGCCACGGG CATGTCGATC
CGTTCGGTCG AGCGGATGAC GAAACATTAT TACGGCCTGC CGCCGCGAAT GCTCGCACGC
AAATATCGCG CGGTGCGCGC GGCGTCGGCG CTGGCGCGCG GCGAAGGGCT GGACGCGGCG
CAGCTTGGCG ACGCCTTTTA CGACCAGTCG CACCTGATCC GCGAGATCAA GCGCTTTGCC
GGGGCAACAC CGGGGCAACT CAGCAACCCG ACGCTGTACA CGCAGGCGAC GACCAGAGGC
CGCAAGCAGT TGGCCGGCAA GGTCGGCCGG ATCGTGTCCG AAACATAA
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| Protein sequence | MSHISSSPAG VGGSAPFELH YFPPDPDLAE MVSSFYVARI NVPRFDEYER ADRPQFRFMT
VADGEYVFAD GHHSPACRAN IVGPTSGRVR AIANGPTTMF GFGLLPAGWA ALMGDDADKL
TDDAMDAADL FGPWIDEVAT ALEQAQTAEE KLVIGNNFAR EVLTRGETAP MWFIRTVDEW
LTATPSPQVP ALVEATGMSI RSVERMTKHY YGLPPRMLAR KYRAVRAASA LARGEGLDAA
QLGDAFYDQS HLIREIKRFA GATPGQLSNP TLYTQATTRG RKQLAGKVGR IVSET
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