Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0674 |
Symbol | |
ID | 4082971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 682492 |
End bp | 683979 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638009033 |
Product | cysteine desulfurase activator complex subunit SufB |
Protein accession | YP_615728 |
Protein GI | 103486167 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01980] FeS assembly protein SufB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.384058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGACA ACACCGAAAC CCGCATCAAG GACCAGGCCG CGCACGCCGC CGCCGCCAGG GTCGCCGATT ATGAACATGG CTGGTCCGCC GACATCGAGA CCGACTTCGC GCCCAAGGGG CTGACCGAGG ATACGGTCCG CTTCATCTCG GCCAAGAAGA ACGAGCCCGA ATGGATGCTC GACTGGCGGC TGAAGGCGTT CCGCCACTGG CAGACGATGG AAACGCCCGA CTGGGCGAAG CTCAACGTGC CGCCGATCGA TTATCAGGAC GCATACTATT ATGCGGCGCC CAAGCCGAAG CCGAAGCTGT CCAGCCTCGA CGAGGTCGAT CCCGAAATCC TCGAAGTCTA CAGGAAGCTC GGCATCCCGA TCGAGGAGCA GAAGGTGCTC GCGGGGGTCG AGGGCGCGCG CAAGGTCGCG GTCGACGCGG TGTTCGACAG CGTCAGCGTC GCGACGACCT TTCGCGAGGA ACTGAAGCGC GCGGGGGTGA TCTTCCTCTC GATTTCCGAA GCGATCCGCG AATATCCCGA GCTGGTGAAA AAATGGCTTG GGCGTGTCGT GCCGATGCAC GACAATTATT TCGCGACGCT CAATTGCGCG GTCTTTTCGG ACGGCACCTT TGTCTATGTG CCCGAGGGCG TGCGCTGCCC GATGGAGCTC AGCACCTATT TCCGCATCAA TGCCGAGAAT ACGGGGCAGT TCGAGCGCAC GCTGATCGTC GCCGACAAGG GCGCTTATGT GTCCTATCTC GAAGGCTGCA CCGCGCCGAT GCGCGACGAG AACCAGCTCC ACGCCGCGGT GGTCGAGCTG GTCGCGCTCG ACGATGCCGA GATCAAGTAC AGCACCGTGC AGAACTGGTA CCCTGGCAAT GCCGAAGGGC TGGGCGGCAT CTATAATTTC GTGACCAAGC GCGCGCTGTG CCAGGGCAAG CGCAGCAAGG TGTCGTGGAC GCAGGTCGAA ACCGGCTCTG CGATCACCTG GAAATACCCA AGCTGTGTGC TCAACGGCGA CGACAGCGTC GGCGAATTCT ACTCGGTCGC GGTCACCAAC AATTTTCAGC AGGCCGACAC CGGCACCAAG ATGATCCACA ATGGCAAGCG CACGCGCTCA ACCATCGTGT CGAAGGGGAT CAGCGCGGGC AAGTCGAACA ACACCTATCG CGGCCTCGTC CGCGTCGCGC CGAATGCCGA GGGGGTGCGC AACTTCACCC AGTGCGACAG TTTGCTGCTC GGCGACCGGT GCGGCGCGCA TACCGTGCCC TATATCGAAG TCCGCAACCC GACCGCCACG GTCGAGCATG AAGCGACGAC GAGCAAGATC AGCGACGACC AGCTCTTCTA CGCCATGCAG CGCGGGCTGG GGCAGGAAGA GGCGGTGGCG CTGATCGTCA ACGGCTTTGC CAAGGAAGTG TTGCAGCAGC TGCCGATGGA GTTTGCGGTC GAGGCGCAGA AATTGCTGGG GATCAGCCTC GAAGGGAGCG TGGGGTGA
|
Protein sequence | MIDNTETRIK DQAAHAAAAR VADYEHGWSA DIETDFAPKG LTEDTVRFIS AKKNEPEWML DWRLKAFRHW QTMETPDWAK LNVPPIDYQD AYYYAAPKPK PKLSSLDEVD PEILEVYRKL GIPIEEQKVL AGVEGARKVA VDAVFDSVSV ATTFREELKR AGVIFLSISE AIREYPELVK KWLGRVVPMH DNYFATLNCA VFSDGTFVYV PEGVRCPMEL STYFRINAEN TGQFERTLIV ADKGAYVSYL EGCTAPMRDE NQLHAAVVEL VALDDAEIKY STVQNWYPGN AEGLGGIYNF VTKRALCQGK RSKVSWTQVE TGSAITWKYP SCVLNGDDSV GEFYSVAVTN NFQQADTGTK MIHNGKRTRS TIVSKGISAG KSNNTYRGLV RVAPNAEGVR NFTQCDSLLL GDRCGAHTVP YIEVRNPTAT VEHEATTSKI SDDQLFYAMQ RGLGQEEAVA LIVNGFAKEV LQQLPMEFAV EAQKLLGISL EGSVG
|
| |