Gene Sala_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0673 
Symbol 
ID4082970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp681974 
End bp682495 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content62% 
IMG OID638009032 
Producthypothetical protein 
Protein accessionYP_615727 
Protein GI103486166 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.3274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAGCC TTTCGCCCAC GGATCAAGCC AAGCGCCTAT CCACCCCTCC CCTTCAGGGG 
AGGGGCCGGG GGTGGGGGCT ATCGGCCTTG GACATCGCCG AACTGCAAAG CCGCGCGCGC
CAGATGCGCA ACAACCCCAC CGAGCCGGAA AAACGGCTGT GGCGGCAGTT GTCGAACGGG
CAGTTGTATG GCCACAAGTT TCGCCGCCAG CAAGTGATCG GTTGGTTCAT TGCGGATTTC
GTCTGTGCGT CGGCGAACCT GATCGTCGAA GTCGATGGTG ACACGCATGA GGAAACGGCC
GATCGCGCCC GCGACAAGGC GCTAGCGGAG CAGGGCTATC GCACCGTCCG CGTTTCGAAC
CATGAAGTGA TGACGAACAT GGATGGCGTG TTGGCCTTCA TTTCTGAAGC GTTGCGTCAG
GCCGATGGCC CCCACCCCAA CCCCTCCCCT GAAGGGGAGG GGCTTAAGAG GGTCGAGGCG
CAGAAATTGC TGGGGATTTC GCTTGAGGGG AGCGTGGGAT GA
 
Protein sequence
MTSLSPTDQA KRLSTPPLQG RGRGWGLSAL DIAELQSRAR QMRNNPTEPE KRLWRQLSNG 
QLYGHKFRRQ QVIGWFIADF VCASANLIVE VDGDTHEETA DRARDKALAE QGYRTVRVSN
HEVMTNMDGV LAFISEALRQ ADGPHPNPSP EGEGLKRVEA QKLLGISLEG SVG