Gene Sala_0670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0670 
Symbol 
ID4082967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp679798 
End bp680526 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID638009029 
ProductSufBD 
Protein accessionYP_615724 
Protein GI103486163 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.351834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGACCA CCCTCCCCTC GCGCCGCGAC GAAGCCTGGC GCTACGCCGA TATTGATGCG 
GTCGCCGCGG CATGGCCGCT GCCTGCGCCC GAGAGCATCA TCGTGCCCGC GGGCGGCCAG
TTCGCGCGCG CGATCGTGCA GGATAGCGGC GCGATCCATC AGATCGAAAT GAGCATCGGC
AAGGACGCGA CCGCCGCGCT GCATATCCTC AACATCGGCG GCGCATACGG CCGCATCGAA
CTCGCCGTGA CGCTCCACGA AGGCGCCGAC TTCACCCTCG GCGCGGCGCA GATCGGCGGC
GGTGCACAGA ATCTGGAAAT CGTCACCACG GTCATCCATG CCGAACCCGG CGCGACGTCG
CGGCAGGTCG TGCGATCGGT ACTCGGCGGC ACCGCGACGG GCACCTATCT GGGCAAGGTC
GCGGTCGCGC GCGATGCGCA GCAGACCGAC AGCGAGCAGG ATGTGAAGGC TATGCTGCTG
AACCGCAGCG CCACCGCCAA CGCCAAGCCC GAACTCGAAA TCTTCGCCGA CGATGTGAAG
TGCGCGCATG GCTGCGCGAT CGGGGAACTG GATGCCATGG CGCTCTATTA TCTCGAGTCG
CGCGGGATGC CGCCCGCCGA GGCGAAGAAG ATATTGCTCC AGGCCTTTGT CGCGGGCGTG
TTCGACGGGG CGGTGGATGA GGCGCGGTTG CAGGAGCTGG CGCTGGCGAA GCTGGGGGAA
CTGGTGTGA
 
Protein sequence
MVTTLPSRRD EAWRYADIDA VAAAWPLPAP ESIIVPAGGQ FARAIVQDSG AIHQIEMSIG 
KDATAALHIL NIGGAYGRIE LAVTLHEGAD FTLGAAQIGG GAQNLEIVTT VIHAEPGATS
RQVVRSVLGG TATGTYLGKV AVARDAQQTD SEQDVKAMLL NRSATANAKP ELEIFADDVK
CAHGCAIGEL DAMALYYLES RGMPPAEAKK ILLQAFVAGV FDGAVDEARL QELALAKLGE
LV