Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0659 |
Symbol | |
ID | 4082749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 669359 |
End bp | 670435 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638009018 |
Product | chorismate synthase |
Protein accession | YP_615713 |
Protein GI | 103486152 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.463158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.312815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTCA ACAGCTTCGG ACGCGTCCTG CGCTTTACGA CCTGGGGGGA AAGTCACGGG CCCGCGCTCG GTGCGGTCGT CGATGGCTGC CCGCCGCGGC TGTCTCTGTC CGAAGCCGAC ATCCAGCCCT TTCTCGACAA GCGTCGCCCC GGCCAGTCGC GCCACACCAC GCAGCGGCAG GAGCCCGACC AGGTGCGTAT CCTGTCGGGG GTGTTCGAAG GCAAGACGAC AGGCACGCCG ATCAGCCTGA TGATCGAGAA TGTCGATCAG CGATCGAAGG ATTATGGCGA GATCGCGCAA GCCTGGCGTC CCGGCCACGC CGATTATGCC TATGACGCCA AATATGGCAT CCGCGATTAT CGCGGCGGCG GCCGGTCGAG CGCGCGCGAG ACTGCGGCGC GTGTCGCGGC GGGCGCTGTC GCGCGGCTGG TGATCCCGGA GGTGCAGATC CACGCCTGGG TCGCGGAGAT CGGCGGCGAT GCGATCGATC CGGCGAACTT CGACCTCGAA GAAATCGATC GCAATCCCTT TTTCTGTCCC GACCCCGCGG CGGCGCAGCG CTGGGAGGCG CTGATGGATT CCGCGCGCAA GGCGGGAAGC TCGCTGGGCG CGGTCATCGA ATGCGCCGCG AGCGGCGTCC CCGCAGGCTG GGGCGCGCCT GTCTATGCCA AGCTCGACAG TGACCTTGCG GCCGCGATGA TGGGGATCAA CGCGGTGAAG GGCGTCGAGA TCGGCGCGGG ATTCGGCGTG GCGCGGCTGC GCGGCGAGGA AAATGCCGAT CCGATGCGCC CCGCCAGCGA CGGCAGCAAC CGCCCCGATT TCCTGTCGAA CAATGCCGGC GGCATCGCGG GCGGCATTTC GACCGGGCAG CCGGTCGTCG TGCGCGTCGC CTTCAAGCCG ACGAGTTCGA TCCTGACCCC GGTGCCGACG GTGAACAAGG CGGGCGAGGC GACCGACATC GTGACCAGGG GCCGCCACGA CCCCTGCGTC GGCATCCGCG GCGCGCCGGT GGTCGAAGCG ATGATGGCGC TGACACTCGC CGACCACAAG CTGCTCCACC GCGCGCAGTG CGGATGA
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Protein sequence | MSFNSFGRVL RFTTWGESHG PALGAVVDGC PPRLSLSEAD IQPFLDKRRP GQSRHTTQRQ EPDQVRILSG VFEGKTTGTP ISLMIENVDQ RSKDYGEIAQ AWRPGHADYA YDAKYGIRDY RGGGRSSARE TAARVAAGAV ARLVIPEVQI HAWVAEIGGD AIDPANFDLE EIDRNPFFCP DPAAAQRWEA LMDSARKAGS SLGAVIECAA SGVPAGWGAP VYAKLDSDLA AAMMGINAVK GVEIGAGFGV ARLRGEENAD PMRPASDGSN RPDFLSNNAG GIAGGISTGQ PVVVRVAFKP TSSILTPVPT VNKAGEATDI VTRGRHDPCV GIRGAPVVEA MMALTLADHK LLHRAQCG
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