| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0650 |
|---|
| Symbol | |
|---|
| ID | 4082740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 662045 |
|---|
| End bp | 662968 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638009009 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_615704 |
|---|
| Protein GI | 103486143 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.477317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0911874 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCG ACTTCGAACA GCAGCGGGTA ACCCTTTCGA CCGGGGTGGA ACTCGACGTC
GTCGATATGG GGCCGAAAGA TGCGCCCGTG CTGATCTTTC TGCACGGCTT TCCCGAATCG
CACCGCACCT GGCGTCATCA GCTGCCGCAT TTTTCCGGCC GTTTCCGCTG CATCGCCCCC
GACCAGCGCG GCTATCGCGG GTCTTCGAAA CCACAGGAAG TGGACGCCTA TACCCCCGAC
AAGCTGATCG CCGACATCTT CGCGCTTGCC GATGCGCTCG GAGTCGACAG GTTCACGATC
GTCGGCCACG ACTGGGGCGG AGCGATCGCC TGGGGCGTTG CGCTGGGCGG TCAGCCGGGC
GGGTTGCACC CCCAATGGGC GGGGCGCGTC ACGCGCGCGG TGATCGCCAA TGCGCCGCAC
CCCGCGATCT TCCAGCGTCT GCTCGCCACC AACGCCCAAC AGCGCGCCGC GAGCCAGTAT
ATCCGCACCT TTCGCGACCC CGCGAGCGAT TCGATCATCG CCGACCATGG CATTGCCGGC
CTGCTCGCCC ACGCCTTTGC GGGAAAGGTG CCCAGCGGCG GGCTGCAACC CGCCGACGAG
ATCGACCGCC TGCTGAAGGA TTGGGAGGAT CGCGACGCCT GCCGCGCGAT GGTCAACTGG
TATCGGGCTT CGCCGCTTGC GGTGCCGGCG ATGGACGAAC CCTATGCCGA ACCGCCTGCG
GCATCCTTTC CGACGCTCAA GATTCCGACG CTGGTGATCT GGGCGCTCGA TGACGTCGCG
CTGCCGCCGT GCAACCTCGA CGGCATGGCC GCGCTCGTCC CCGATGTCAC GATCGTCAAG
GTGCCCGATT GCGGGCATTT CGTGCCGTGG GATGCGCCCG ACGCCGTGAA TGCGGCAATG
GATGCGTTTC TCGCGCAGGG CTGA
|
|---|
| Protein sequence | MIGDFEQQRV TLSTGVELDV VDMGPKDAPV LIFLHGFPES HRTWRHQLPH FSGRFRCIAP
DQRGYRGSSK PQEVDAYTPD KLIADIFALA DALGVDRFTI VGHDWGGAIA WGVALGGQPG
GLHPQWAGRV TRAVIANAPH PAIFQRLLAT NAQQRAASQY IRTFRDPASD SIIADHGIAG
LLAHAFAGKV PSGGLQPADE IDRLLKDWED RDACRAMVNW YRASPLAVPA MDEPYAEPPA
ASFPTLKIPT LVIWALDDVA LPPCNLDGMA ALVPDVTIVK VPDCGHFVPW DAPDAVNAAM
DAFLAQG
|
|---|
| |