Gene Sala_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0646 
Symbol 
ID4082736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp659601 
End bp660131 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content69% 
IMG OID638009005 
Productheat shock protein DnaJ-like protein 
Protein accessionYP_615700 
Protein GI103486139 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.607248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0426843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGGCT GCCGCGAGGC CGGAGAGTTT CGCGCACCCG CATCGGCGCG CCGCTCGTCC 
GACGGCCCGC CGCCCTGGCG CTGGCTGTGC CTCGAACATG TGCGCGCGTT CAACGCGGGC
TATAATTTTT TCGAGGGGAT GAGCGCCGAT CAGATCATGG CGGCGCAATC GCCAACCGCG
GGCTGGGAAA CCGAAAGCCG CGCCTTTCGG CCCGCGGGCA GCGCCGACCT GCCGCCGCGC
TGGGCCGATT TCAAGGATCC GATGGACGCG CTCGGCGCGC GGTTCCGGCA GCGGATGGAC
GAAGCGCGAC GCGAGGTGGC GAACCCGCGC TTCACGCGCG AGGAGCATCG CGCCATGCAG
CTGATGGATT TGCCGCCCGA CGCCGACCGC GCCGCGCTCC GCCGCCGCTA CAGCGAGCTT
GTACGCAAAT ATCATCCCGA CCGTAATGGC GGCGACCGTC GTTTCGAGGC GCGACTCGGC
CAAGTGGTCG AAGCTTATCA GTTGCTGAGG AAAACCGCGG CGTTCGCATA G
 
Protein sequence
MPGCREAGEF RAPASARRSS DGPPPWRWLC LEHVRAFNAG YNFFEGMSAD QIMAAQSPTA 
GWETESRAFR PAGSADLPPR WADFKDPMDA LGARFRQRMD EARREVANPR FTREEHRAMQ
LMDLPPDADR AALRRRYSEL VRKYHPDRNG GDRRFEARLG QVVEAYQLLR KTAAFA