Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0646 |
Symbol | |
ID | 4082736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 659601 |
End bp | 660131 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638009005 |
Product | heat shock protein DnaJ-like protein |
Protein accession | YP_615700 |
Protein GI | 103486139 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.607248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0426843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGGCT GCCGCGAGGC CGGAGAGTTT CGCGCACCCG CATCGGCGCG CCGCTCGTCC GACGGCCCGC CGCCCTGGCG CTGGCTGTGC CTCGAACATG TGCGCGCGTT CAACGCGGGC TATAATTTTT TCGAGGGGAT GAGCGCCGAT CAGATCATGG CGGCGCAATC GCCAACCGCG GGCTGGGAAA CCGAAAGCCG CGCCTTTCGG CCCGCGGGCA GCGCCGACCT GCCGCCGCGC TGGGCCGATT TCAAGGATCC GATGGACGCG CTCGGCGCGC GGTTCCGGCA GCGGATGGAC GAAGCGCGAC GCGAGGTGGC GAACCCGCGC TTCACGCGCG AGGAGCATCG CGCCATGCAG CTGATGGATT TGCCGCCCGA CGCCGACCGC GCCGCGCTCC GCCGCCGCTA CAGCGAGCTT GTACGCAAAT ATCATCCCGA CCGTAATGGC GGCGACCGTC GTTTCGAGGC GCGACTCGGC CAAGTGGTCG AAGCTTATCA GTTGCTGAGG AAAACCGCGG CGTTCGCATA G
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Protein sequence | MPGCREAGEF RAPASARRSS DGPPPWRWLC LEHVRAFNAG YNFFEGMSAD QIMAAQSPTA GWETESRAFR PAGSADLPPR WADFKDPMDA LGARFRQRMD EARREVANPR FTREEHRAMQ LMDLPPDADR AALRRRYSEL VRKYHPDRNG GDRRFEARLG QVVEAYQLLR KTAAFA
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