Gene Sala_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0644 
Symbol 
ID4082734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp657907 
End bp658896 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content63% 
IMG OID638009003 
Productcobalt chelatase, pCobS small subunit 
Protein accessionYP_615698 
Protein GI103486137 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID[TIGR01650] cobaltochelatase, CobS subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.751429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0530402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA TCCCGAACAG CCTCCCCGAC CATCACGGAT CGACGCTGCT GGCGGCGCCC 
GATACCGAGG TCGATGCGCG CGAGGTCTTC GGCGTCGATA TCGACATGAA GGTACCCGCG
TTCAGCGAGG CCGACGCGCG CGTGCCCGAC CTCGACCCCG CCTATGTCTT CGACGGCGAC
ACGACGCTCG CGATCCTCGC GGGCTTCAAA TACAACCGCC GCGTGATGGT GCAGGGCTAT
CACGGCACGG GCAAGTCGAC GCATATCGAA CAGGTCGCGG CGCGACTCAA ATGGCCGTGC
ATCCGCGTCA ACCTCGACGC GCATATCAGC CGCATCGACC TCGTCGGCCG CGACGCGATC
GTGCTCAAGG ACGGGCAGCA GGTCACGGAG TTTCGCGAAG GCCTGCTCCC CTGGGCGCTC
CAGACCCCCA CGGCGCTGGT CTTCGACGAA TATGACGCGG GCCGCCCCGA CGTGATGTTC
GTGATCCAGC GCGTGCTCGA GACCGAGGGC AAGCTGACGT TGCTCGACCA GAACCGCGTG
ATCCGTCCCA ACCCCTGGTT CCGCCTTTTC TCGACCGCCA ACACCGTCGG CCTCGGCGAC
ACGAGCGGCC TCTATCACGG CACGCAACAG ATCAACCAGG GCCAGATGGA CCGCTGGAAC
ATCGTCGTCA CGCTCAACTA TCTGCCCGCC GCCACCGAAA GCGCGATCGT CCTCGCCAAG
GTGCCCGACA CCGACGACAC GACCGTCGCC AATATGGTCA AGGTCGCCGA TCTGACGCGG
CAGGGCTTCA TCAACGGCGA TATCTCGACG GTGATGAGCC CGCGCACGGT CATCAGCTGG
GCTCAGAATA CCGCGATCTT CCACAATATC GGCTTCGCCT TCCGCCTTTC CTTCCTCAAC
AAGTGCGACG AGGCCGAACG CATGATCGTC GCCGAATATT ATCAGCGCGT GTTCGGCGAA
GATTTGCCTG AAAGCGTAAT CGCCAAATGA
 
Protein sequence
MTDIPNSLPD HHGSTLLAAP DTEVDAREVF GVDIDMKVPA FSEADARVPD LDPAYVFDGD 
TTLAILAGFK YNRRVMVQGY HGTGKSTHIE QVAARLKWPC IRVNLDAHIS RIDLVGRDAI
VLKDGQQVTE FREGLLPWAL QTPTALVFDE YDAGRPDVMF VIQRVLETEG KLTLLDQNRV
IRPNPWFRLF STANTVGLGD TSGLYHGTQQ INQGQMDRWN IVVTLNYLPA ATESAIVLAK
VPDTDDTTVA NMVKVADLTR QGFINGDIST VMSPRTVISW AQNTAIFHNI GFAFRLSFLN
KCDEAERMIV AEYYQRVFGE DLPESVIAK