| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0642 |
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| Symbol | |
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| ID | 4082732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 654582 |
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| End bp | 656405 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009001 |
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| Product | cobalt chelatase, CobT subunit |
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| Protein accession | YP_615696 |
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| Protein GI | 103486135 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
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| TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0619466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCC AATCCCCCCT CGACGATTTC AAGGCCGCGC TGTCGAGCGT CGCGCGCGCG
GTGACGCGCG ACGCCGAGGT CGAGGTGGGC TTTACCGCCG ACGCGCCCGC GCAGGTGGGC
AAGGCGATCA AGGTGCCGAC CCCGTCGCGC ACCCTGCCCG CCGATCAGGT CGCCGAAGCG
CGTGGTTTCG CGGACTCCTA TGCTTTGCGG ATGAAGCATC ACAGCGAGAA ACTGCACGCC
GCAGCGCGCC CCGCCGATCC CGTTGCCGCC GCCGCCTTCG ACGCGATGGA GCGCGCGCGG
ATCGAGGCGC TGGGCGCGCG GCATATGGCG GGGATGCGCG GCAATCTGGC CGCCAGCCTC
GCGATGCGGA TGCGCTCGGA CCCGATCAGC CGCGCGCAGG ACCGGGGCGA CGTGCCGATG
TCGAGCGCGC TCGAACTGAT GCTGCGCGAA GCGCTGACCG GCGAACGCGC GCCGCAGGGG
ACCGAGACCG GCCTGTCGCT GGTGCGCGAA TGGATCAGCA AGGAGGCGGG CGGCGATTTG
ACCGCGCTGT CGATGCTGCT CGACGATCAG GCCGCGTTCG CCGAAACCGC GAAAATCGCG
CTCCGCCACC TCGACCTCAT CCAGAGCGAC GAGCCGCTGG AACAAGGCGC CGAGGACGGC
GGCGAAGAGG ATCAGACCGA AGCCGAAGAA AGTCAGGAAG AGCAGGAAAG CGAAGACGGC
GGTGCCGGCG AAAGCCAGGT CGACGCGCGC GCCGAAATGG CGGGCGATCA GGCCGACGAC
GGCGACAGCG ACCCCGACGC GCAGGAGATG GAGGCCGACG GCGAACCCGA AATGGGCGGC
GAAGGCGACG AGGGGATGCT GCCCGTCCGC CCCAACCGCC TGCCGGGCGA CATTCCCGAT
TTCAATTACC TCCGCTTCAC CGAAAAGCAT GACGAGATCA TCGCCGCGAC CGAGCTGTGC
GACGCCGACG AACTCGCCCG CCTGCGCGCC TATCTCGACC AGCAGATGAC GCATCTGCAG
GGCGCGGTGA CCAAGCTCGC CAACCGGCTC CAGCGCCGCC TGATGGCGCA GCAGAACCGC
GCGTGGGATT TCGATCAGGA GGAGGGCCAG CTCGACGCCG CGCGGCTCGC GCGCGTCATC
GTCTCGCCCG GCCAGTCCTT GAGCTACAAG ATCGAGCGTG ACACCGACTT CCGCGACACC
GTCGTCTCGC TGCTCATCGA CAATAGCGGG TCGATGCGCG GACGCCCGAT CAGCATCGCC
GCGATCAGCG CCGACATCCT CGCGCGCACG CTCGAACGCT GCGGCGTCAA GACCGAGATA
TTGGGCTTCA CCACGCGCAC ATGGAAGGGC GGGCAGAGCC GCGAGGACTG GCTCGCCGCG
GGTCGCCCCG CGCACCCCGG CCGCCTCAAC GACCTCCGCC ACATCATCTA CAAGCCCGCC
GACGAACCCT ATCGCCGCGC GCGCAAGTCG CTGGGGCTGA TGATGCGCGA GGGGCTGCTC
AAGGAAAATA TCGACGGCGA GGCGCTGATG TGGGCGCACA GCCGCATCAT CGCCCGCCCC
GAGGAACGCC GCATCCTGAT GGTGATTTCG GACGGCGCGC CGGTCGACGA CAGCACCTTG
TCGGTCAACC ACGGCGCCTA TCTGGACCAG CACCTGCGCC AGGTCATCGA CTGGATCGAA
AACCGCTCGC CCGTCGAACT CTGCGCGATC GGCATCGGCC ACGACGTGAC GCGCTACTAC
AGCCGCGCGG TAACGATCAT GGATGCCGAG CAATTGGGCG GCACGATGGT CGAACAGCTG
GCGGGGTTGT TCGACGTGGA TTGA
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| Protein sequence | MSAQSPLDDF KAALSSVARA VTRDAEVEVG FTADAPAQVG KAIKVPTPSR TLPADQVAEA
RGFADSYALR MKHHSEKLHA AARPADPVAA AAFDAMERAR IEALGARHMA GMRGNLAASL
AMRMRSDPIS RAQDRGDVPM SSALELMLRE ALTGERAPQG TETGLSLVRE WISKEAGGDL
TALSMLLDDQ AAFAETAKIA LRHLDLIQSD EPLEQGAEDG GEEDQTEAEE SQEEQESEDG
GAGESQVDAR AEMAGDQADD GDSDPDAQEM EADGEPEMGG EGDEGMLPVR PNRLPGDIPD
FNYLRFTEKH DEIIAATELC DADELARLRA YLDQQMTHLQ GAVTKLANRL QRRLMAQQNR
AWDFDQEEGQ LDAARLARVI VSPGQSLSYK IERDTDFRDT VVSLLIDNSG SMRGRPISIA
AISADILART LERCGVKTEI LGFTTRTWKG GQSREDWLAA GRPAHPGRLN DLRHIIYKPA
DEPYRRARKS LGLMMREGLL KENIDGEALM WAHSRIIARP EERRILMVIS DGAPVDDSTL
SVNHGAYLDQ HLRQVIDWIE NRSPVELCAI GIGHDVTRYY SRAVTIMDAE QLGGTMVEQL
AGLFDVD
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