Gene Sala_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0621 
Symbol 
ID4082557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand- 
Start bp632389 
End bp633027 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID638008980 
Productcytochrome c, class I 
Protein accessionYP_615675 
Protein GI103486114 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.276705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.860065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATC GCAACAATAC CATTGCCGGC TGGGTGCTGT TCGCCGGCAT ATGCGCGCTG 
GGCCTGACCA TCGGGTCGAG CATGTTGTTC GCGACCCACG CCCCCGAAAA GCCCGGATAT 
CCGATCGAAG ACGCCGAAGC CGGTGCAGGC GGCGGCGAAT CGGCGGTGCC GCTCGCCAAC 
CTGCTCGCAG CCGCCGACCC CGCGAAGGGC GAAGCGGTAT TCGCGAAATG CGCGGCATGC 
CACACGATCA ACGCGGGCGG AGCCAACGGC ATCGGTCCCA ATCTTTACGG CGCGCTGGGC 
AAGGCGCATG GCCATGTTCC CGGCTTTGCC TATTCGGAGG CGCTGAAGAG CGTTCCCGGA 
AACTGGGACT TCGCGAGCAT GGACGAATGG CTGAAAAGCC CGCGTAAATA TGCGCCGGGC 
ACCAAGATGT CCTTTGCCGG CCTGAGCAGC CCCGAAGATC GCGCGAACCT GATCGTCTAT 
ATGAACACGC AGGGATCGAA CCTGCCGCTG CCGCCGGTCG AAGAGGTCGC GACCGCCGAT 
GCCGCAGCGG GCGCTGCCGA AGGCGCTGCA CCGGCTGCAG AAGGCGCGGC CGCCCCGGCG 
GCCGAAGGCG CCGCCGCCCC GGCCGAAGCC ACGAAATAA
 
Protein sequence
MDNRNNTIAG WVLFAGICAL GLTIGSSMLF ATHAPEKPGY PIEDAEAGAG GGESAVPLAN 
LLAAADPAKG EAVFAKCAAC HTINAGGANG IGPNLYGALG KAHGHVPGFA YSEALKSVPG 
NWDFASMDEW LKSPRKYAPG TKMSFAGLSS PEDRANLIVY MNTQGSNLPL PPVEEVATAD 
AAAGAAEGAA PAAEGAAAPA AEGAAAPAEA TK