Gene Sala_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0620 
Symbol 
ID4082556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp631946 
End bp632389 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content70% 
IMG OID638008979 
Productcytochrome c, class I 
Protein accessionYP_615674 
Protein GI103486113 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.363015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.813784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCG CGCCCGTCCT GCTGGCGGGC GCGCTGCTGC TCGCCGGCTG CGGCAAGAGC 
GACGCGCCGC CGACCGACGA CCCGGTGGCC GACAGCCCGG CGACGGGCGA GTCGGCGACC
GACGCGCCCG CGGTCGAACC GACTGCGGCG ATGGGCGAGC AAATCTTCCG CCGCTGCGTC
GCCTGTCACA CCGTCGACAA GGGCGGGCGC CACGGTATCG GCCCGAATCT GCACGGCATC
GTCGGTGCCC CCGTCGCGGC AAAGGCAGGC TTTTCCTATT CAGGCGCGAT GAAGGCCAAG
GGTGGCGTGT GGGACGAAGC CGCGCTCGAC GCCTATCTCA AAGCGCCGAT GAAGGACGTC
CCCGGCACGC GCATGGCCTT TGCGGGGGTG GTCGACGCCA CCGACCGCAA GGCGCTGATC
CTGTATCTGC AAGCGCAGAA ATAG
 
Protein sequence
MRTAPVLLAG ALLLAGCGKS DAPPTDDPVA DSPATGESAT DAPAVEPTAA MGEQIFRRCV 
ACHTVDKGGR HGIGPNLHGI VGAPVAAKAG FSYSGAMKAK GGVWDEAALD AYLKAPMKDV
PGTRMAFAGV VDATDRKALI LYLQAQK