Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0620 |
Symbol | |
ID | 4082556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 631946 |
End bp | 632389 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638008979 |
Product | cytochrome c, class I |
Protein accession | YP_615674 |
Protein GI | 103486113 |
COG category | [C] Energy production and conversion |
COG ID | [COG3474] Cytochrome c2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.363015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.813784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCG CGCCCGTCCT GCTGGCGGGC GCGCTGCTGC TCGCCGGCTG CGGCAAGAGC GACGCGCCGC CGACCGACGA CCCGGTGGCC GACAGCCCGG CGACGGGCGA GTCGGCGACC GACGCGCCCG CGGTCGAACC GACTGCGGCG ATGGGCGAGC AAATCTTCCG CCGCTGCGTC GCCTGTCACA CCGTCGACAA GGGCGGGCGC CACGGTATCG GCCCGAATCT GCACGGCATC GTCGGTGCCC CCGTCGCGGC AAAGGCAGGC TTTTCCTATT CAGGCGCGAT GAAGGCCAAG GGTGGCGTGT GGGACGAAGC CGCGCTCGAC GCCTATCTCA AAGCGCCGAT GAAGGACGTC CCCGGCACGC GCATGGCCTT TGCGGGGGTG GTCGACGCCA CCGACCGCAA GGCGCTGATC CTGTATCTGC AAGCGCAGAA ATAG
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Protein sequence | MRTAPVLLAG ALLLAGCGKS DAPPTDDPVA DSPATGESAT DAPAVEPTAA MGEQIFRRCV ACHTVDKGGR HGIGPNLHGI VGAPVAAKAG FSYSGAMKAK GGVWDEAALD AYLKAPMKDV PGTRMAFAGV VDATDRKALI LYLQAQK
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