| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0616 |
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| Symbol | |
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| ID | 4082552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 626996 |
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| End bp | 628582 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008975 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_615670 |
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| Protein GI | 103486109 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.640549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC CCAAAGTCCT TATCAGCGAC AAGATGGACC CCAAGGCCGC CGCAATCTTC
AAGGAACGCG GTATCCGCGT CGACGAAATC ACCGGCAAAA CCAGGGACGA GCTGATCGCG
ATGATCGGCG ACTACGACGG CCTTGCGATC CGGTCCGCCA CGAAAGTCAC CGCCGACGTC
CTTGCCGCCG CGACAAAGCT GAAGGTCGTC GGCCGGGCCG GGATCGGCGT CGACAATATC
GACATTCCGG AGGCGTCGAA AAAGGGCGTC GTCGTGATGA ACACGCCCTT CGGCAATTCG
ATCACCACCG CCGAACATGC GATCGCGATG ATGTTCGCTC TCGCGCGCCA GATTCCCGAA
GCCAATGCGC TGACGCAGGC GGGCAAATGG CCGAAGAACG ACTTCATGGG CGTCGAGCTG
ACGTCGAAGA CGCTCGGCCT GATCGGCTGC GGCAACATCG GCAGCATCGT CGCCGAACGC
GCGCTCGGCC TCAAGATGAA GGTTGTCGCC TTCGACCCCT TCCTGACCCC CGAACGCGCG
ATCGAGCTGG GCGTCGAGAA GGTCGACCTC GACACTTTGC TCGCGCGCGC CGACTTCATC
ACGCTGCACA CGCCGCTGAC CGATCAGACG CGCAATGTGC TGTCGAAGGA AAATCTCGCC
AAAACCAGGA AGGGCGTGCG GATCATCAAT TGCGCGCGCG GCGGGCTGAT CGACGAAGCG
GCGCTGAAGG ACGCGCTCGA CAGCGGCCAT GTCGCCGGCG CGGCGCTCGA CGTGTTCGCG
GTCGAGCCAC CGCCGGCGGA CCATCCGCTG TTCAACACCC CCAATTTCAT CTGCACCCCG
CATCTTGGCG CGTCGACCGA CGAGGCGCAG GTCAATGTCG CGATCCAGGT CGCCGAACAG
ATCAGCGATT ATCTGCTCAC CGGCGGCATA ACCAATGCGC TGAACGTCCC CAGCCTGTCG
GCCGAGGAAG CGCCGAAGCT GCGCCCCTAT ATGAGCCTCG CCGAAAAGCT CGGCAGCCTC
GTCGGCCAGC TTGCGCACGA CAATCTGACG CACATCTCGG TCGAGGTCGA GGGTGCAGCG
GCCGAACTCA ACCTGAAACC GATCGTCGCT GCGGTGCTCA CCGGGCTGAT GCGCCGCTAT
TCGGACAGCG TGAACATGGT CAACGCGCCG CATCTCGCGC GCGAACGCGG CCTCGATGTG
CGCGAAGTGC GCCACGACCG CGAAGGCGAT TATCACACGC TCGTCCGCGT GACCGTGGCG
ACCGAGGCGG GCGACCGTTC GGTGGCGGGC ACGCTGTTCG GCAACAACGA GCCGCGCCTC
GTCGAAATGT TCGGCATCAA GGTCGAAGCC GACCTCGACG GCGACATGCT CTATATCGTC
AACGAGGACG CGCCGGGCTT CATCGGCCGC ATCGGCAGCA CGCTGGGCGA CGCCGGACTC
AACATCGGCA CCTTCCACCT CGGCCGCCGC GCCGCGGGCG GCGAAGCGGT GCTGCTGCTC
AGCCTCGATT CGCCGATGCC CGAACCGCTG TTGTGGCAAG TTTGCCAGCT TCCCGGCGTG
AAGATGGTGA AGGGTCTGAA GTTCTGA
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| Protein sequence | MTQPKVLISD KMDPKAAAIF KERGIRVDEI TGKTRDELIA MIGDYDGLAI RSATKVTADV
LAAATKLKVV GRAGIGVDNI DIPEASKKGV VVMNTPFGNS ITTAEHAIAM MFALARQIPE
ANALTQAGKW PKNDFMGVEL TSKTLGLIGC GNIGSIVAER ALGLKMKVVA FDPFLTPERA
IELGVEKVDL DTLLARADFI TLHTPLTDQT RNVLSKENLA KTRKGVRIIN CARGGLIDEA
ALKDALDSGH VAGAALDVFA VEPPPADHPL FNTPNFICTP HLGASTDEAQ VNVAIQVAEQ
ISDYLLTGGI TNALNVPSLS AEEAPKLRPY MSLAEKLGSL VGQLAHDNLT HISVEVEGAA
AELNLKPIVA AVLTGLMRRY SDSVNMVNAP HLARERGLDV REVRHDREGD YHTLVRVTVA
TEAGDRSVAG TLFGNNEPRL VEMFGIKVEA DLDGDMLYIV NEDAPGFIGR IGSTLGDAGL
NIGTFHLGRR AAGGEAVLLL SLDSPMPEPL LWQVCQLPGV KMVKGLKF
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