| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0614 |
|---|
| Symbol | |
|---|
| ID | 4082550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 625278 |
|---|
| End bp | 625709 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638008973 |
|---|
| Product | aromatic ring-cleaving dioxygenase-like protein |
|---|
| Protein accession | YP_615668 |
|---|
| Protein GI | 103486107 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3805] Aromatic ring-cleaving dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.412688 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGA AGGCGGCGTG CATGACCGAC CCCGACGCCC CCTATCACGC CCATGTCTAT
TATGATCCTG CCGAGAGGTC CGCGGCCGCC GCACTGCGCG ACGATTTCGG CCGCAACTCC
GCGATCCTGT TCGTCGGCGC GATGGCCGAC GGCGCCGCCG GGCCGCATCC GATCGCCCAA
TATGAGGTGC ATTTCCTCGC GCGCTCGCGC GATGCCGTTG TGGCGGCGAT TGCGGCGACG
GGCCTGCGCG CGCTGGTTCA TCCGCTCACC GACGACGATG TGGCCGACCA CACCAGCCTG
GCGCAATGGA TCGGCGAACC GGTCGATCTC GACCTGACCG TGCTCGATCC GCCGGGAGGC
AATCAGGGGA TCCCGCGTTT CGGGCTTTCG GACTTTCAGG CCTCGACAGG ACCGTCGGCC
CCCAGCACAT AG
|
|---|
| Protein sequence | MDPKAACMTD PDAPYHAHVY YDPAERSAAA ALRDDFGRNS AILFVGAMAD GAAGPHPIAQ
YEVHFLARSR DAVVAAIAAT GLRALVHPLT DDDVADHTSL AQWIGEPVDL DLTVLDPPGG
NQGIPRFGLS DFQASTGPSA PST
|
|---|
| |