Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0604 |
Symbol | |
ID | 4082540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 613866 |
End bp | 614639 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638008963 |
Product | hypothetical protein |
Protein accession | YP_615658 |
Protein GI | 103486097 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02186] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.10299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCG TGCGCGCCTT GATCCTGTGG CTCGCGCTGA CGCTGCTGCC GCTCACGGCG GCTCGCGCGA CCGATCCACG GCTGGTCCCC GACGTGTCGA GCCGCGCGAT CGACATCCAG TACAGCTTTA CCGGCGAGGA ACTGCTGCTG TTCGGGGCGA TCCTCTATCC TGATCAGCGG CTGCCCGACG ACCGTGCCGA CATCGTCGTC GTGCTGAAGG GGCCGGTACG ACCGATCGTG CTGCGCGAAA AGCGCCGCGT TGCGGGTATA TGGGTCAACG CGAGAAGCAT TCGCCTGCGC ACCGCGCCCA GCTTTTATGC CATCGGCTCG TCGCGGCCGA TCGACAGGCT GGTCGACGAA CGCACGGCAG CGATCTTCGA GCTCGGCCTT GCCAATCTGT CGATGTCGCC AACGGGATTT TCGGAGGCGA AAACGCTCGA ACGCTTCGAG GCGGGGTTGA TCGACCTGTA TCGCCGCGCC GGGCTGTTCG TTGAAAATCC CTCGGCGGTC GAGATTACCG AAGGCGTGCT CTATCGCGCG CGCATCCCGG TTCCCGCGCG GGTTCCGGTG GGCACCTATC GCGCCGAAAC CTATTTGATC AGTCGCGGCC GCGTGCTCGC GGTCGCTTCG CGTGATGTCC AGATACGCAA GACGGGCTTC GAGCGCTTCG TCGCGCGCGC GGCCGAAGAG CACGGGTTTC TTTACGGCCT GTCGGCGGTG CTGATGTCGC TTGGGCTGGG CTATGCCGCC TCGGCTGTCT TCCGCCGTCG CTGA
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Protein sequence | MTGVRALILW LALTLLPLTA ARATDPRLVP DVSSRAIDIQ YSFTGEELLL FGAILYPDQR LPDDRADIVV VLKGPVRPIV LREKRRVAGI WVNARSIRLR TAPSFYAIGS SRPIDRLVDE RTAAIFELGL ANLSMSPTGF SEAKTLERFE AGLIDLYRRA GLFVENPSAV EITEGVLYRA RIPVPARVPV GTYRAETYLI SRGRVLAVAS RDVQIRKTGF ERFVARAAEE HGFLYGLSAV LMSLGLGYAA SAVFRRR
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