Gene Sala_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0604 
Symbol 
ID4082540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp613866 
End bp614639 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID638008963 
Producthypothetical protein 
Protein accessionYP_615658 
Protein GI103486097 
COG category 
COG ID 
TIGRFAM ID[TIGR02186] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.10299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG TGCGCGCCTT GATCCTGTGG CTCGCGCTGA CGCTGCTGCC GCTCACGGCG 
GCTCGCGCGA CCGATCCACG GCTGGTCCCC GACGTGTCGA GCCGCGCGAT CGACATCCAG
TACAGCTTTA CCGGCGAGGA ACTGCTGCTG TTCGGGGCGA TCCTCTATCC TGATCAGCGG
CTGCCCGACG ACCGTGCCGA CATCGTCGTC GTGCTGAAGG GGCCGGTACG ACCGATCGTG
CTGCGCGAAA AGCGCCGCGT TGCGGGTATA TGGGTCAACG CGAGAAGCAT TCGCCTGCGC
ACCGCGCCCA GCTTTTATGC CATCGGCTCG TCGCGGCCGA TCGACAGGCT GGTCGACGAA
CGCACGGCAG CGATCTTCGA GCTCGGCCTT GCCAATCTGT CGATGTCGCC AACGGGATTT
TCGGAGGCGA AAACGCTCGA ACGCTTCGAG GCGGGGTTGA TCGACCTGTA TCGCCGCGCC
GGGCTGTTCG TTGAAAATCC CTCGGCGGTC GAGATTACCG AAGGCGTGCT CTATCGCGCG
CGCATCCCGG TTCCCGCGCG GGTTCCGGTG GGCACCTATC GCGCCGAAAC CTATTTGATC
AGTCGCGGCC GCGTGCTCGC GGTCGCTTCG CGTGATGTCC AGATACGCAA GACGGGCTTC
GAGCGCTTCG TCGCGCGCGC GGCCGAAGAG CACGGGTTTC TTTACGGCCT GTCGGCGGTG
CTGATGTCGC TTGGGCTGGG CTATGCCGCC TCGGCTGTCT TCCGCCGTCG CTGA
 
Protein sequence
MTGVRALILW LALTLLPLTA ARATDPRLVP DVSSRAIDIQ YSFTGEELLL FGAILYPDQR 
LPDDRADIVV VLKGPVRPIV LREKRRVAGI WVNARSIRLR TAPSFYAIGS SRPIDRLVDE
RTAAIFELGL ANLSMSPTGF SEAKTLERFE AGLIDLYRRA GLFVENPSAV EITEGVLYRA
RIPVPARVPV GTYRAETYLI SRGRVLAVAS RDVQIRKTGF ERFVARAAEE HGFLYGLSAV
LMSLGLGYAA SAVFRRR